RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	AKAP9	Q99996	3911 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	IGLON5	A6NGN9	336 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TMX2-CTNND1	H3BSU7	103 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	AREL1	O15033	823 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	SART1	O43290	800 aa	Known RBP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	BNIP3L	O60238	219 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	CNTN5	O94779	1100 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	CD160	O95971	181 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	RPLP0	P05388	317 aa	Known RBP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	MYL1	P05976	194 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	PRR29	P0C7W0	189 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	ZNF18	P17022	549 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	CD82	P27701	267 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	L1CAM	P32004	1257 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	GGCX	P38435	758 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	ADAM9	Q13443	819 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TAF5	Q15542	800 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	MEA1	Q16626	185 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	ALF	Q53S48	1182 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	RABGAP1L	Q5R372	815 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	BORA	Q6PGQ7	559 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TMEM270	Q6UE05	265 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	MACC1	Q6ZN28	852 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TMEM110	Q86TL2	294 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	PCDH19	Q8TAB3	1148 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	LMO3	Q8TAP4	145 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	STK32A	Q8WU08	396 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	PMEPA1	Q969W9	287 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	SLC35C1	Q96A29	364 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	FAM149B1	Q96BN6	582 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	INTS4	Q96HW7	963 aa	Known RBP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TMEM74	Q96NL1	305 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	GFM1	Q96RP9	751 aa	Known RBP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	EPAS1	Q99814	870 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	STRADB	Q9C0K7	418 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	TNKS2	Q9H2K2	1166 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	IL36A	Q9UHA7	158 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	APPL1	Q9UKG1	709 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	MAPK8IP1	Q9UQF2	711 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	HPSE	Q9Y251	543 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	PLAA	Q9Y263	795 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	ITM2B	Q9Y287	266 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	HS3ST4	Q9Y661	456 aa		9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	9.24	□□□□□ -0.93
PRKCH-208	ENST00000553846		A0A0D9SEW6	157 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	FPGT	O14772	594 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	CLDN11	O75508	207 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	RNF224	P0DH78	156 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	TBXAS1	P24557	533 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	CCR10	P46092	362 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	YWHAE	P62258	255 aa	Known RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	CCDC15	Q0P6D6	951 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	DPYD	Q12882	1025 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	STIL	Q15468	1287 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	DENND1B	Q6P3S1	775 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	LVRN	Q6Q4G3	990 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	LINGO4	Q6UY18	593 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	SPRED1	Q7Z699	444 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	ATP6V0D2	Q8N8Y2	350 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	TP53I13	Q8NBR0	393 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	GPR156	Q8NFN8	814 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	GLMN	Q92990	594 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	USP7	Q93009	1102 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	NKD1	Q969G9	470 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	TMEM159	Q96B96	161 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	FEM1C	Q96JP0	617 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	RPRD1A	Q96P16	312 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	CPEB1	Q9BZB8	566 aa	Known RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	LRRN3	Q9H3W5	708 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	POPDC2	Q9HBU9	364 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	SEPT10	Q9P0V9	454 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	PLEKHB1	Q9UF11	243 aa	Predicted RBP	9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	VANGL2	Q9ULK5	521 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	CNTN6	Q9UQ52	1028 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	APC	P25054	2843 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	POLQ	O75417	2590 aa		9.23	□□□□□ -0.93
PRKCH-208	ENST00000553846	MED13	Q9UHV7	2174 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	SHANK1	Q9Y566	2161 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	NF1	P21359	2839 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	IGLV3-10	A0A075B6K4	115 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	FAM237A	A0A1B0GTK4	181 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846		E5RJQ4	531 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	PMM2	O15305	246 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	TSPAN6	O43657	245 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	STX10	O60499	249 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	ANXA6	P08133	673 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	JMJD7	P0C870	316 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	RPL13	P26373	211 aa	Known RBP	9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	CCR1	P32246	355 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	SERPINH1	P50454	418 aa	Known RBP	9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	HK3	P52790	923 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	CDH4	P55283	916 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	YPEL5	P62699	121 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	YWHAZ	P63104	245 aa	Known RBP	9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	C16orf72	Q14CZ0	275 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	ALG11	Q2TAA5	492 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	CERCAM	Q5T4B2	595 aa		9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	ESRP1	Q6NXG1	681 aa	Known RBP	9.22	□□□□□ -0.93
PRKCH-208	ENST00000553846	CCNJL	Q8IV13	435 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms