RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZNF548Q8NEK5 533 aaPredicted RBP15.7■□□□□ 0.1
MRPS28-209ENST00000522987 RFFLQ8WZ73 363 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 FEM1CQ96JP0 617 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 LGMNQ99538 433 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 VPS16Q9H269 839 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 TCEAL2Q9H3H9 227 aaPredicted RBP15.7■□□□□ 0.1
MRPS28-209ENST00000522987 PRORYQ9H606 182 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 NLRC4Q9NPP4 1024 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 KLF15Q9UIH9 416 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 U3KQA8 63 aa15.7■□□□□ 0.1
MRPS28-209ENST00000522987 LRP4O75096 1905 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 C16orf96A6NNT2 1141 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SPINT1O43278 529 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 USP12O75317 370 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CKMT1AP12532 417 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CHRNB2P17787 502 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 ACTN2P35609 894 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SCNN1AP37088 669 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CXADRP78310 365 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 GABREP78334 506 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SGCGQ13326 291 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 C1orf61Q13536 156 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CCDC14Q49A88 953 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 KIAA1161Q6NSJ0 714 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
MRPS28-209ENST00000522987 BNIPLQ7Z465 357 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SPACA3Q8IXA5 215 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CCDC185Q8N715 623 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SNIP1Q8TAD8 396 aaKnown RBP15.69■□□□□ 0.1
MRPS28-209ENST00000522987 IFI44Q8TCB0 444 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 LMX1AQ8TE12 382 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SLC39A7Q92504 469 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 KLHL32Q96NJ5 620 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 UBL7Q96S82 380 aaPredicted RBP15.69■□□□□ 0.1
MRPS28-209ENST00000522987 CEP44Q9C0F1 390 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 ABCG4Q9H172 646 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 GANQ9H2C0 597 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 NLGN3Q9NZ94 848 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 OR12D3Q9UGF7 316 aa15.69■□□□□ 0.1
MRPS28-209ENST00000522987 NOCTQ9UK39 431 aaKnown RBP15.69■□□□□ 0.1
MRPS28-209ENST00000522987 SCAMP1O15126 338 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 EPHB6O15197 1021 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 LSM8O95777 96 aaKnown RBP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 ADRA1BP35368 520 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 POLR2FP61218 127 aaKnown RBP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 HNRNPKP61978 463 aaKnown RBP eCLIP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 FMO1Q01740 532 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 TCP11X2Q5H9J9 407 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 GUSBP11Q6P575 273 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 FOXR1Q6PIV2 292 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 ZNF783Q6ZMS7 281 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 VPS36Q86VN1 386 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 MAPK15Q8TD08 544 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 ARHGEF2Q92974 986 aaKnown RBP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 KLF6Q99612 283 aaPredicted RBP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 STK33Q9BYT3 514 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 SYNDIG1Q9H7V2 258 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 FAM207AQ9NSI2 230 aaPredicted RBP15.68■□□□□ 0.1
MRPS28-209ENST00000522987 HS3ST3A1Q9Y663 406 aa15.68■□□□□ 0.1
MRPS28-209ENST00000522987 PMS2P1A4D2B8 440 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 NEMP2A6NFY4 417 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 FPGTO14772 594 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 C1QL1O75973 258 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 LRIG2O94898 1065 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 CSF2P04141 144 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 JUNDP17535 347 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 TGM2P21980 687 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 SDC4P31431 198 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 TLE3Q04726 772 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 SLC20A2Q08357 652 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 EIF2B5Q13144 721 aaKnown RBP15.67■□□□□ 0.1
MRPS28-209ENST00000522987 C3orf38Q5JPI3 329 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 MANEALQ5VSG8 457 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 CDCP2Q5VXM1 449 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 EFL1Q7Z2Z2 1120 aaKnown RBP15.67■□□□□ 0.1
MRPS28-209ENST00000522987 NLRP14Q86W24 1093 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 PARGQ86W56 976 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 TBC1D31Q96DN5 1066 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 DEPDC7Q96QD5 511 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 WRAP53Q9BUR4 548 aaKnown RBP15.67■□□□□ 0.1
MRPS28-209ENST00000522987 KLC2Q9H0B6 622 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 NUP62CLQ9H1M0 184 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 PPARGC1AQ9UBK2 798 aaKnown RBP15.67■□□□□ 0.1
MRPS28-209ENST00000522987 PNMA8BQ9ULN7 279 aaPredicted RBP15.67■□□□□ 0.1
MRPS28-209ENST00000522987 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
MRPS28-209ENST00000522987 SMG1Q96Q15 3661 aaKnown RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 SPTY2D1-AS1A0A0U1RR47 76 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 H3BM21 787 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 MUSKO15146 869 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 AQP9O43315 295 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 BUB1O43683 1085 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 MMP20O60882 483 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 PLEKP08567 350 aaPredicted RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 NME1P15531 152 aaKnown RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 RHOQP17081 205 aa15.66■□□□□ 0.1
MRPS28-209ENST00000522987 ERCC5P28715 1186 aaPredicted RBP15.66■□□□□ 0.1
MRPS28-209ENST00000522987 IGFALSP35858 605 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms