RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 PPP1R2P1Q96PQ5 205 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 CSPG4P5Q96PW8 444 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 VAT1Q99536 393 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 HINFPQ9BQA5 517 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 FEM1AQ9BSK4 669 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 AP1M1Q9BXS5 423 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ZYG11BQ9C0D3 744 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 MKRN2Q9H000 416 aaKnown RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 EPC1Q9H2F5 836 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TMEM245Q9H330 911 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 CATSPERBQ9H7T0 1116 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 VIPAS39Q9H9C1 493 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 CWC15Q9P013 229 aaKnown RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 NCDNQ9UBB6 729 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ZNF212Q9UDV6 495 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 AMACRQ9UHK6 382 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
SDCBP-206ENST00000519115 SLCO3A1Q9UIG8 710 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 RAB23Q9ULC3 237 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 NEU3Q9UQ49 428 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ERVW-1Q9UQF0 538 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 TBC1D30Q9Y2I9 924 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 ADAMTS9Q9P2N4 1935 aa7.74□□□□□ -1.17
SDCBP-206ENST00000519115 FRYLO94915 3013 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 A0A0D9SEW6 157 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 C5orf60A6NFR6 353 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 TTC34A8MYJ7 566 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 RAD51CO43502 376 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 GCATO75600 419 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 VAV1P15498 845 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 GLDCP23378 1020 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 OR1E1P30953 314 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CNR2P34972 360 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 ACTN2P35609 894 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 GJC1P36383 396 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 MAGEA6P43360 314 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 DNA2P51530 1060 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 OXCT1P55809 520 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 YBEYP58557 167 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CDK16Q00536 496 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CAMK2GQ13555 558 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SLC12A1Q13621 1099 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 E2F5Q15329 346 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 ELF2Q15723 593 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CA9Q16790 459 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SMTNL2Q2TAL5 461 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 USP39Q53GS9 565 aaKnown RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 LINGO4Q6UY18 593 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 RFX8Q6ZV50 586 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SETD3Q86TU7 594 aaPredicted RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 HOOK3Q86VS8 718 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CPNE8Q86YQ8 564 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 JAMLQ86YT9 394 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 TMPRSS6Q8IU80 811 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 DCLK2Q8N568 766 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 PQLC3Q8N755 202 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 ACTL9Q8TC94 416 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 HSPH1Q92598 858 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CAVIN3Q969G5 261 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 LRRC45Q96CN5 670 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 OLFM3Q96PB7 478 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 HEMGNQ9BXL5 484 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 DDX47Q9H0S4 455 aaKnown RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SEMA4AQ9H3S1 761 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 DHX35Q9H5Z1 703 aaKnown RBP7.73□□□□□ -1.17
SDCBP-206ENST00000519115 PCDH9Q9HC56 1237 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 PRSS16Q9NQE7 514 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 NDFIP2Q9NV92 336 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 VPS51Q9UID3 782 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 SLC25A13Q9UJS0 675 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 CYP8B1Q9UNU6 501 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 OR51B4Q9Y5P0 310 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 BAHCC1Q9P281 2608 aa7.73□□□□□ -1.17
SDCBP-206ENST00000519115 MYO15AQ9UKN7 3530 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 TCRBV7S2A1N4TA0A589 114 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 AP3B1O00203 1094 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CBX4O00257 560 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 EEF2KO00418 725 aaKnown RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PPP1R12AO14974 1030 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 DAPK3O43293 454 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 BNIP3LO60238 219 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SIN3BO75182 1162 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 HEXIM1O94992 359 aaKnown RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 MT-CO1P00395 513 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 SRPRAP08240 638 aaKnown RBP7.72□□□□□ -1.17
SDCBP-206ENST00000519115 RBP3P10745 1247 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 KRT10P13645 584 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 RHOQP17081 205 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 CCNCP24863 283 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 IVDP26440 423 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 EPHB2P29323 1055 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 ACVRL1P37023 503 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 P2RY2P41231 377 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 MAPKAPK2P49137 400 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 NDST2P52849 883 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 PLK1P53350 603 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 COPAP53621 1224 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 TPI1P60174 286 aa7.72□□□□□ -1.17
SDCBP-206ENST00000519115 GUCY2DQ02846 1103 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms