RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 MECOMQ03112 1051 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 TFCP2Q12800 502 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 PICALMQ13492 652 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 RAB30Q15771 203 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 HSP90AB4PQ58FF6 505 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 TTC39AQ5SRH9 613 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 MFSD14CQ5VZR4 134 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 TLDC1Q6P9B6 456 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 ERC1Q8IUD2 1116 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 ZNF548Q8NEK5 533 aaPredicted RBP4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 PRSS33Q8NF86 280 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 NSMCE1Q8WV22 266 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 MAGEB5Q9BZ81 275 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 OSBPL5Q9H0X9 879 aaPredicted RBP4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 EBF3Q9H4W6 596 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 MORF4L1Q9UBU8 362 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 HERC5Q9UII4 1024 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 PA2G4Q9UQ80 394 aaKnown RBP4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 HS3ST3B1Q9Y662 390 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 A0A1B0GUL6 1792 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 TRANK1O15050 2925 aa4.75□□□□□ -1.65
GTF3C3-207ENST00000451088 MYO10Q9HD67 2058 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 KBTBD13C9JR72 458 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 DCXO43602 365 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 USP12O75317 370 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 OAZ2O95190 189 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TOMM40O96008 361 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TIMP1P01033 207 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 RPS6KB1P23443 525 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 GABRB3P28472 473 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 ADORA1P30542 326 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 HOXD12P35452 270 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 IDUAP35475 653 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 RGS2P41220 211 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 CPA2P48052 419 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 B4GALNT1Q00973 533 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 GAB1Q13480 694 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 ATP1A4Q13733 1029 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 RAPGEF1Q13905 1077 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 CNGA3Q16281 694 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TMEM196Q5HYL7 178 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 NAA16Q6N069 864 aaPredicted RBP4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 RBM44Q6ZP01 1051 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 CCDC28AQ8IWP9 274 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TEX11Q8IYF3 940 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 SLC44A5Q8NCS7 719 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TRPV1Q8NER1 839 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 GPRC5AQ8NFJ5 357 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 OVCA2Q8WZ82 227 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 NSUN4Q96CB9 384 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TRMT61AQ96FX7 289 aaKnown RBP4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 POT1Q9NUX5 634 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 HMG20BQ9P0W2 317 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 RFX7Q2KHR2 1363 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 CHD7Q9P2D1 2997 aa4.74□□□□□ -1.65
GTF3C3-207ENST00000451088 TTC3P53804 2025 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 SLC22A23A1A5C7 686 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PRYO14603 147 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 SURF6O75683 361 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 ASNSP08243 561 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 FGF2P09038 288 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 SNHG28P0DPA3 235 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PSG1P11464 419 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 MYOGP15173 224 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 CSF2RAP15509 400 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 DRD1P21728 446 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 MAPK4P31152 587 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PRIM2P49643 509 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 IRX3P78415 501 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 SPP2Q13103 211 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.657e-6■□□□□ 9.9
GTF3C3-207ENST00000451088 SLC5A9Q2M3M2 681 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 ANO1Q5XXA6 986 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 RAP1GAP2Q684P5 730 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 CCDC174Q6PII3 467 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 GPR142Q7Z601 462 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 ZDHHC17Q8IUH5 632 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 FOXP4Q8IVH2 680 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 ITPRIPQ8IWB1 547 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 CCAR1Q8IX12 1150 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 AKAP1Q92667 903 aaKnown RBP eCLIP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 NUDT22Q9BRQ3 303 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 SARGQ9BW04 601 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PORCNQ9H237 461 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 TXNRD2Q9NNW7 524 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 GJB4Q9NTQ9 266 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 ZBTB40Q9NUA8 1239 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 VPS4AQ9UN37 437 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 PCDHB2Q9Y5E7 798 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 HEMK1Q9Y5R4 338 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 TRIOO75962 3097 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 XIRP2A4UGR9 3374 aa4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 FLNBO75369 2602 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-207ENST00000451088 MED19A0JLT2 244 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 DDTLA6NHG4 134 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 CD8B2A6NJW9 211 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 TTC34A8MYJ7 566 aa4.72□□□□□ -1.65
GTF3C3-207ENST00000451088 C19orf81C9J6K1 198 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms