RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 KRT33AO76009 404 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 OR4Q2P0C623 313 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 VAV1P15498 845 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 SOX6P35712 828 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 WASP42768 502 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 PCYT1AP49585 367 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 RASAL3Q86YV0 1011 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 FAM126BQ8IXS8 530 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 LENG1Q96BZ8 264 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-219ENST00000620786 PSME2Q9UL46 239 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 NFATC1O95644 943 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 ITGB5P18084 799 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 SARSP49591 514 aaKnown RBP11.51□□□□□ -0.57
CLIP1-219ENST00000620786 MAXP61244 160 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 PRKCZQ05513 592 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 PFKFB4Q16877 469 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 ALG11Q2TAA5 492 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 TBCELQ5QJ74 424 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 TYW3Q6IPR3 259 aaKnown RBP11.51□□□□□ -0.57
CLIP1-219ENST00000620786 CFAP52Q8N1V2 620 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 MSL3Q8N5Y2 521 aaKnown RBP11.51□□□□□ -0.57
CLIP1-219ENST00000620786 SPPL2BQ8TCT7 592 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 GOLGA2P5Q9HBQ8 144 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 LZTS1Q9Y250 596 aa11.51□□□□□ -0.57
CLIP1-219ENST00000620786 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 EPN2O95208 641 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 LTA4HP09960 611 aaKnown RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 FCGR1AP12314 374 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 GOT1P17174 413 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CALB2P22676 271 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 BIKQ13323 160 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 MPPE1Q53F39 396 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 EPS8L1Q8TE68 723 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RIPOR3Q96MK2 946 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 NRDE2Q9H7Z3 1164 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 DNAJC18Q9H819 358 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 TBC1D14Q9P2M4 693 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 OR10H1Q9Y4A9 318 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CHADO15335 359 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RGS5O15539 181 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ABCG1P45844 678 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RXRGP48443 463 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CRADDP78560 199 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CNSTQ6PJW8 725 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 MACC1Q6ZN28 852 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 MON1AQ86VX9 555 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 EPHX4Q8IUS5 362 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 GLIS3Q8NEA6 775 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 GLMNQ92990 594 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 TAS2R14Q9NYV8 317 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 PTPRJQ12913 1337 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 SMNDC1O75940 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 SLC25A14O95258 325 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HLA-DQA2P01906 255 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HIST1H2ABP04908 130 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 SERPINB3P29508 390 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RCN1Q15293 331 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 NT5DC1Q5TFE4 455 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HIST3H2AQ7L7L0 130 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 OR6K2Q8NGY2 324 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 TCP10LQ8TDR4 215 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ING5Q8WYH8 240 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HIST1H2ACQ93077 130 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 MAML3Q96JK9 1138 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 SEMA4AQ9H3S1 761 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 DEC1Q9P2X7 70 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CROTQ9UKG9 612 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ASTN2O75129 1339 aaPredicted RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 GCATO75600 419 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CYP1A2P05177 515 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ETS1P14921 441 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 KELP23276 732 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 IFNGR2P38484 337 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HNF4AP41235 474 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 IRAK1P51617 712 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CHST9Q7L1S5 443 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 PARGQ86W56 976 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 NPAS4Q8IUM7 802 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 LRRC49Q8IUZ0 686 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 STAG3L4Q8TBR4 150 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 MYO19Q96H55 970 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ACP6Q9NPH0 428 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 GMIPQ9P107 970 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CNOT3O75175 753 aaKnown RBP11.5□□□□□ -0.57
CLIP1-219ENST00000620786 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 VHLP40337 213 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 CRATP43155 626 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 KLC1Q07866 573 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 TAF10Q12962 218 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 FAAH2Q6GMR7 532 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ABHD15Q6UXT9 468 aa11.5□□□□□ -0.57
CLIP1-219ENST00000620786 ROGDIQ9GZN7 287 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms