RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MFSD4AQ8N468 514 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 S100ZQ8WXG8 99 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SGCDQ92629 289 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 DPF3Q92784 378 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 TRIM63Q969Q1 353 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ATP13A2Q9NQ11 1180 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 DAGLAQ9Y4D2 1042 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 H0Y858 1186 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SLC22A1O15245 554 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PSTPIP1O43586 416 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 GSRP00390 522 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 PRLP01236 227 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 CD4P01730 458 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 GSNP06396 782 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 CCDC159P0C7I6 412 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ELK4P28324 431 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 RRM2P31350 389 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 CYP2C18P33260 490 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 GMPRP36959 345 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 NT5C2P49902 561 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 TNFAIP2Q03169 654 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 CETN1Q12798 172 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 BMT2Q1RMZ1 405 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-218ENST00000608440 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 TPH2Q8IWU9 490 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 MCOLN2Q8IZK6 566 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 RASSF5Q8WWW0 418 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 DACH2Q96NX9 599 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 RMDN3Q96TC7 470 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 FUNDC2Q9BWH2 189 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SEZ6LQ9BYH1 1024 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 ACSS2Q9NR19 701 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SUCOQ9UBS9 1254 aaKnown RBP12.74□□□□□ -0.37
CTCFL-218ENST00000608440 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
CTCFL-218ENST00000608440 A0A0X1KG70 313 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 C9IYK1 514 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 E7ESA3 106 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ACSL4O60488 711 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SEC14L2O76054 403 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 GFAPP14136 432 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 RFX1P22670 979 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 DSTNP60981 165 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CCDC14Q49A88 953 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ZFP69Q49AA0 526 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-218ENST00000608440 LGSNQ5TDP6 509 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SCML4Q8N228 414 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 FAM109AQ8N4B1 249 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ZNF781Q8N8C0 355 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 LPGAT1Q92604 370 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SLITRK1Q96PX8 696 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 APBA2Q99767 749 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ACAT2Q9BWD1 397 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 MTMR12Q9C0I1 747 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 C8orf4Q9NR00 106 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SMYD2Q9NRG4 433 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ATPIF1Q9UII2 106 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 GAKO14976 1311 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 FRMPD2Q68DX3 1309 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-218ENST00000608440 A0A0G2JMP0 313 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CENPXA8MT69 81 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 TISP43B9A030 160 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 TBX1O43435 398 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SEMA3DO95025 777 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 EPN2O95208 641 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ICAM2P13598 275 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CD40LGP29965 261 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CRHR1P34998 444 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 ECE1P42892 770 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 PPP4CP60510 307 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 PSMC5P62195 406 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CCNA1P78396 465 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 RHDQ02161 417 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SNTA1Q13424 505 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 DSC3Q14574 896 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 SMAD1Q15797 465 aaKnown RBP12.73□□□□□ -0.37
CTCFL-218ENST00000608440 CATSPEREQ5SY80 951 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 HID1Q8IV36 788 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
CTCFL-218ENST00000608440 FLCNQ8NFG4 579 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 RSAD2Q8WXG1 361 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 PIK3R3Q92569 461 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 NRBF2Q96F24 287 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 TUBA1CQ9BQE3 449 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
CTCFL-218ENST00000608440 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms