RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 SAYSD1Q9NPB0 183 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ZDHHC4Q9NPG8 344 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CYP26B1Q9NR63 512 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 DDX28Q9NUL7 540 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 TAS2R7Q9NYW3 318 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 LPAR3Q9UBY5 353 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ANAPC2Q9UJX6 822 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 PCDHGB1Q9Y5G3 927 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 PCDHA8Q9Y5H6 950 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CORINQ9Y5Q5 1042 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CACNG2Q9Y698 323 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 A0A1B0GTQ1 180 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TYW5A2RUC4 315 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 ANKRD34BA5PLL1 514 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 BTBD17A6NE02 478 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 NPIPB15A6NHN6 443 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 METTL12A8MUP2 240 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 DCLK1O15075 740 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ANGPT2O15123 496 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 EIF3DO15371 548 aaKnown RBP eCLIP3.3□□□□□ -1.881e-6■■□□□ 12.7
TTC3-214ENST00000472398 HCRTR2O43614 444 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 F9P00740 461 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 MPOP05164 745 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CKMP06732 381 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 NFICP08651 508 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 KITP10721 976 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ATF2P15336 505 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SELPP16109 830 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SLC9A1P19634 815 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 LCN1P31025 176 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 HOXC8P31273 242 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ATP5C1P36542 298 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 MAGEA1P43355 309 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 GPR4P46093 362 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 MTNR1BP49286 362 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 BMXP51813 675 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ARHGDIAP52565 204 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SMSP52788 366 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CRYBB1P53674 252 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 PRMT2P55345 433 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 P2RX3P56373 397 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 PLOD1Q02809 727 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 GSTM4Q03013 218 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 FAAP100Q0VG06 881 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TUBB2AQ13885 445 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 NFIXQ14938 502 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SPCS2Q15005 226 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 NOMO1Q15155 1222 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 RAB30Q15771 203 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 C3orf36Q3SXR2 165 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 USH1GQ495M9 461 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 PLEKHO1Q53GL0 409 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 EXOSC6Q5RKV6 272 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 SAPCD1Q5SSQ6 148 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 PRAMEF20Q5VT98 475 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 C18orf63Q68DL7 685 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 LINC00696Q6ZRV3 163 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CLEC17AQ6ZS10 378 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 BBS12Q6ZW61 710 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TRAPPC11Q7Z392 1133 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CCDC103Q8IW40 242 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CCDC36Q8IYA8 594 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SNX31Q8N9S9 440 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 FSIP1Q8NA03 581 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 GLIS1Q8NBF1 620 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 MCPH1Q8NEM0 835 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TRPV1Q8NER1 839 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 OR8K1Q8NGG5 319 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 KLHDC4Q8TBB5 520 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 DNAJA4Q8WW22 397 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 GLMPQ8WWB7 406 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 OR1E3Q8WZA6 343 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 FAM122AQ96E09 287 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 METTL2AQ96IZ6 378 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 TUBB2BQ9BVA1 445 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 COLEC11Q9BWP8 271 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TRIM54Q9BYV2 358 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 SNX25Q9H3E2 840 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 RMND5AQ9H871 391 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TMEM8AQ9HCN3 771 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 KCNH7Q9NS40 1196 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 TBC1D13Q9NVG8 400 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 OXSMQ9NWU1 459 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ZSCAN32Q9NX65 697 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 DNAJB12Q9NXW2 375 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 FRRS1LQ9P0K9 344 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 MYO1AQ9UBC5 1043 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 CNOT7Q9UIV1 285 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 GDF2Q9UK05 429 aaPredicted RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 TBX20Q9UMR3 447 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.3□□□□□ -1.886e-7■■□□□ 12.5
TTC3-214ENST00000472398 STON1Q9Y6Q2 735 aa3.3□□□□□ -1.88
TTC3-214ENST00000472398 ROCK2O75116 1388 aaKnown RBP3.3□□□□□ -1.88
TTC3-214ENST00000472398 C2orf92A0A1B0GVN3 265 aa3.29□□□□□ -1.88
TTC3-214ENST00000472398 VWA3AA6NCI4 1184 aa3.29□□□□□ -1.88
TTC3-214ENST00000472398 CIAO1O76071 339 aa3.29□□□□□ -1.88
TTC3-214ENST00000472398 MYO1DO94832 1006 aa3.29□□□□□ -1.88
TTC3-214ENST00000472398 LGI1O95970 557 aa3.29□□□□□ -1.88
TTC3-214ENST00000472398 PROCP04070 461 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms