RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PADI6Q6TGC4 694 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CROCCP2Q86T23 111 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC71Q8IV32 467 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIB2Q92519 343 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SDCCAG3Q96C92 435 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 LPIN3Q9BQK8 851 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FTHL17Q9BXU8 183 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 WWP1Q9H0M0 922 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SDCBP2Q9H190 292 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 THAP1Q9NVV9 213 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ITGA11Q9UKX5 1188 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 BRWD3Q6RI45 1802 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM159BA6NKW6 160 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 hCG_2039718K7EN88 272 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NFIBO00712 420 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 UBFD1O14562 309 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NDUFS2O75306 463 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 C4BPAP04003 597 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ADRA2AP08913 450 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 IL7RP16871 459 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC1A6P48664 564 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 GP2P55259 537 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 C21orf59P57076 290 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ZIK1Q3SY52 487 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ZBED5Q49AG3 693 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF789Q5FWF6 425 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CEP78Q5JTW2 689 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PDPK2PQ6A1A2 396 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FLAD1Q8NFF5 587 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FEZF2Q8TBJ5 459 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC7A3Q8WY07 619 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MAML3Q96JK9 1138 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NACC1Q96RE7 527 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MCMBPQ9BTE3 642 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 C1QTNF6Q9BXI9 259 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 B3GNT5Q9BYG0 378 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SLIRPQ9GZT3 109 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 XYLT2Q9H1B5 865 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ADAMTS10Q9H324 1103 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TRPV5Q9NQA5 729 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MOSPD1Q9UJG1 213 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FAF1Q9UNN5 650 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NEUROG3Q9Y4Z2 214 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TPRP12270 2363 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PLXNA1Q9UIW2 1896 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SAC3D1A6NKF1 404 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SPATA31C2B4DYI2 1134 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIM24O15164 1050 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 HOXC11O43248 304 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 C2P06681 752 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 LDHBP07195 334 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 LDHCP07864 332 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ALDOCP09972 364 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SDHBP21912 280 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 KDELR1P24390 212 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CXCR3P49682 368 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CRISP3P54108 245 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PRKAA2P54646 552 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MFSD14BQ5SR56 506 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 IQSEC1Q6DN90 963 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 USP51Q70EK9 711 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIML2Q8N7C3 387 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NLRP7Q8WX94 980 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MAP6Q96JE9 813 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FYTTD1Q96QD9 318 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM213AQ9BRX8 229 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PDZD7Q9H5P4 517 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 AKIP1Q9NQ31 210 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ARHGAP26Q9UNA1 814 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDHGA11Q9Y5H2 935 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SVILO95425 2214 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 AHCTF1Q8WYP5 2266 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DOCK6Q96HP0 2047 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PLIN4Q96Q06 1357 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 LRRC14BA6NHZ5 514 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CBFA2T3O75081 653 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 INMTO95050 263 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CFBP00751 764 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC130P13994 396 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 HNRNPLP14866 589 aaKnown RBP eCLIP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 SEPHS1P49903 392 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ECT2LQ008S8 904 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 KIZQ2M2Z5 673 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 DNAL1Q4LDG9 190 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 CAVIN4Q5BKX8 364 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT39Q6A163 491 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 OTOP3Q7RTS5 596 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MMAAQ8IVH4 418 aaKnown RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ABI1Q8IZP0 508 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PDIK1LQ8N165 341 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PYROXD2Q8N2H3 581 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF786Q8N393 782 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 PDPRQ8NCN5 879 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 THAP11Q96EK4 314 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 GLT1D1Q96MS3 346 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 UHRF1Q96T88 793 aaPredicted RBP4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 MRGBPQ9NV56 204 aa4.61□□□□□ -1.67
DEPDC1-202ENST00000456315 NDUFA13Q9P0J0 144 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms