RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PANX2Q96RD6 677 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 BAG1Q99933 345 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 UBAC1Q9BSL1 405 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CRB3Q9BUF7 120 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 EFHD1Q9BUP0 239 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TTLL2Q9BWV7 592 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 RNF26Q9BY78 433 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CXorf36Q9H7Y0 433 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 TRMT1Q9NXH9 659 aaKnown RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ASIC5Q9NY37 505 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 CDC23Q9UJX2 597 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 ZHX1Q9UKY1 873 aaPredicted RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 SHOC2Q9UQ13 582 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 MRPS17Q9Y2R5 130 aaKnown RBP5.42□□□□□ -1.54
LINC00458-202ENST00000427299 PCDHGB2Q9Y5G2 931 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 DGKBQ9Y6T7 804 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 STRCQ7RTU9 1775 aa5.42□□□□□ -1.54
LINC00458-202ENST00000427299 A0A087WV62 115 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 KIF28PB7ZC32 967 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 MYO1CO00159 1063 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 IFIT3O14879 490 aaKnown RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 DSCR3O14972 297 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 THAP12O43422 761 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 KIF5CO60282 957 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 IDH1O75874 414 aaKnown RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 PRKCBP05771 671 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 EEF1GP26641 437 aaKnown RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 TDO2P48775 406 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 CARSP49589 748 aaKnown RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 TIMM10P62072 90 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 SRSF1Q07955 248 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 MYO1EQ12965 1108 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 FAM187BQ17R55 369 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 SLC9C2Q5TAH2 1124 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 DEPDC1Q5TB30 811 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 WDR78Q5VTH9 848 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 KIAA1161Q6NSJ0 714 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 LDHAL6AQ6ZMR3 332 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 MFSD6Q6ZSS7 791 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 BEND5Q7L4P6 421 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 CHST3Q7LGC8 479 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 PIP4P1Q86T03 277 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 MYLK4Q86YV6 388 aaPredicted RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 TBC1D10CQ8IV04 446 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 DIS3L2Q8IYB7 885 aaKnown RBP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 OSCP1Q8WVF1 389 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 SLC26A6Q9BXS9 759 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 STK33Q9BYT3 514 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 LY9Q9HBG7 655 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 RMND1Q9NWS8 449 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 AATFQ9NY61 560 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00458-202ENST00000427299 DKK4Q9UBT3 224 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 SWAP70Q9UH65 585 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 LRCH1Q9Y2L9 728 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 PPP2R2CQ9Y2T4 447 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 NFE2L3Q9Y4A8 694 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 ZNF532Q9HCE3 1301 aa5.41□□□□□ -1.54
LINC00458-202ENST00000427299 MYH4Q9Y623 1939 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 BCL9O00512 1426 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 ERVV-1B6SEH8 477 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 AKR1B15C9JRZ8 316 aaPredicted RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 OAZ2O95190 189 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 PNMA6AP0CW24 399 aaPredicted RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MARCKSP29966 332 aaPredicted RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 ADORA1P30542 326 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 KRT2P35908 639 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 PPP1R2P41236 205 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 E2F1Q01094 437 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 TNFAIP2Q03169 654 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 BIRC3Q13489 604 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 PNOCQ13519 176 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 ZIK1Q3SY52 487 aaPredicted RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 PARP10Q53GL7 1025 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 TTLL5Q6EMB2 1281 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 RNF44Q7L0R7 432 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 SLC15A3Q8IY34 581 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MPP5Q8N3R9 675 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 RUBCNQ92622 972 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 ESR2Q92731 530 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 CUL5Q93034 780 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 GSDMAQ96QA5 445 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 FYTTD1Q96QD9 318 aaKnown RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MMS19Q96T76 1030 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 EIF2AQ9BY44 585 aaKnown RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MAGEF1Q9HAY2 307 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 AS3MTQ9HBK9 375 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 ZNHIT6Q9NWK9 470 aaKnown RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 WWOXQ9NZC7 414 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MID2Q9UJV3 735 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 PCDHGB3Q9Y5G1 929 aa5.4□□□□□ -1.54
LINC00458-202ENST00000427299 SRPRBQ9Y5M8 271 aaKnown RBP5.4□□□□□ -1.54
LINC00458-202ENST00000427299 MYH14Q7Z406 1995 aaKnown RBP5.4□□□□□ -1.55
LINC00458-202ENST00000427299 SLX4Q8IY92 1834 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 TAF1LQ8IZX4 1826 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 ARFGEF1Q9Y6D6 1849 aa5.39□□□□□ -1.55
LINC00458-202ENST00000427299 VWA3AA6NCI4 1184 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms