RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 PPP1R14CQ8TAE6 165 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 RAB3IL1Q8TBN0 382 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 ISL2Q96A47 359 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 MCMBPQ9BTE3 642 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 MRPL9Q9BYD2 267 aaKnown RBP17.13■□□□□ 0.33
CHKA-201ENST00000265689 NT5MQ9NPB1 228 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 SLC2A6Q9UGQ3 507 aa17.13■□□□□ 0.33
CHKA-201ENST00000265689 HOXA2O43364 376 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ITM2AO43736 263 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 LYPLA1O75608 230 aaPredicted RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 DNAJB2P25686 324 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 PSEN1P49768 467 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 IRF9Q00978 393 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ZBTB16Q05516 673 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ESRP1Q6NXG1 681 aaKnown RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 C10orf107Q8IVU9 208 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 PSMG2Q969U7 264 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 SKA1Q96BD8 255 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 PABPC5Q96DU9 382 aaKnown RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 VPS39Q96JC1 886 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 TTC24A2A3L6 582 aaPredicted RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 TLR5O60602 858 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ATP5HO75947 161 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 IGLV3-27P01718 113 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 HSPA1AP0DMV8 641 aaKnown RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 HSPA1BP0DMV9 641 aaKnown RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 PGGT1BP53609 377 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 WNT3AP56704 352 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 ITKQ08881 620 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 INSCQ1MX18 579 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 PDPK2PQ6A1A2 396 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 RANBP10Q6VN20 620 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 CRLF3Q8IUI8 442 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 SLC7A6OSQ96CW6 309 aaPredicted RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
CHKA-201ENST00000265689 TBX21Q9UL17 535 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 TRANK1O15050 2925 aa17.12■□□□□ 0.33
CHKA-201ENST00000265689 A0A096LPK6 155 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 A8MUI8 341 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 VAPBO95292 243 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 GJA8P48165 433 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 KCNQ1P51787 676 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
CHKA-201ENST00000265689 GRM3Q14832 879 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 SNCBQ16143 134 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 CCDC91Q7Z6B0 441 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 TTC7BQ86TV6 843 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 PPHLN1Q8NEY8 458 aaKnown RBP17.11■□□□□ 0.33
CHKA-201ENST00000265689 UTP4Q969X6 686 aaKnown RBP17.11■□□□□ 0.33
CHKA-201ENST00000265689 SEZ6LQ9BYH1 1024 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 LRMDAQ9H2I8 198 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 THAP1Q9NVV9 213 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 ATP6V1G2O95670 118 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 ARNTP27540 789 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 GABRB3P28472 473 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 RENBPP51606 427 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 OTOP2Q7RTS6 562 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 ALYREFQ86V81 257 aaKnown RBP17.11■□□□□ 0.33
CHKA-201ENST00000265689 TNS4Q8IZW8 715 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 SLC25A51Q9H1U9 297 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 SP110Q9HB58 689 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 ARL8BQ9NVJ2 186 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 BAIAP2L1Q9UHR4 511 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 SLC39A10Q9ULF5 831 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 HBS1LQ9Y450 684 aaKnown RBP17.11■□□□□ 0.33
CHKA-201ENST00000265689 TCAF1Q9Y4C2 921 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 DOCK4Q8N1I0 1966 aa17.11■□□□□ 0.33
CHKA-201ENST00000265689 GREB1Q4ZG55 1949 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 TIMM44O43615 452 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 HAUS5O94927 633 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 C2P06681 752 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 EN2P19622 333 aaPredicted RBP17.1■□□□□ 0.33
CHKA-201ENST00000265689 SAT1P21673 171 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 CD86P42081 329 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 DSC2Q02487 901 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 SMARCB1Q12824 385 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 SEPT6Q14141 434 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 IHHQ14623 411 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 CNGA3Q16281 694 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 MARC1Q5VT66 337 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 ATG14Q6ZNE5 492 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 ZC3HC1Q86WB0 502 aaKnown RBP17.1■□□□□ 0.33
CHKA-201ENST00000265689 DENND6AQ8IWF6 608 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 KCNK4Q9NYG8 393 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
CHKA-201ENST00000265689 AHSGP02765 367 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms