RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PHEXP78562 749 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CDK18Q07002 472 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GRM3Q14832 879 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 KIF19Q2TAC6 998 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SYDE1Q6ZW31 735 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 OTUB2Q96DC9 234 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ZBTB18Q99592 522 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 C8orf33Q9H7E9 229 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SPHK2Q9NRA0 654 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GDE1Q9NZC3 331 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 BAG5Q9UL15 447 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PCDHGB4Q9UN71 923 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 APOC4-APOC2K7ER74 178 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ADAM12O43184 909 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CLASP2O75122 1294 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PPP1R37O75864 691 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 APOC2P02655 101 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SLC35G4P0C7Q5 338 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PYGMP11217 842 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ITIH2P19823 946 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TDGQ13569 410 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 INAVAQ3KP66 663 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GKAP1Q5VSY0 366 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 FBXL22Q6P050 247 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TRIM42Q8IWZ5 723 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GSPT2Q8IYD1 628 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 SERAC1Q96JX3 654 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PCDHB18PQ96TA0 734 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CLSTN3Q9BQT9 956 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 FAM124BQ9H5Z6 455 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 WDR6Q9NNW5 1121 aaKnown RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 IGSF9Q9P2J2 1179 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 GSAPA4D1B5 854 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 H3BM21 787 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ANXA6P08133 673 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 CEBPBP17676 345 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PSMB4P28070 264 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TPD52P55327 224 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 HDAC4P56524 1084 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 AASDHQ4L235 1098 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PHYKPLQ8IUZ5 450 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 AHI1Q8N157 1196 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TMEM130Q8N3G9 435 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ELMO1Q92556 727 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 PSMG2Q969U7 264 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TCEAL4Q96EI5 215 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 MED8Q96G25 268 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 TLR6Q9Y2C9 796 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 COQ4Q9Y3A0 265 aa9.22□□□□□ -0.93
HDAC9-229ENST00000622668 ZNF840PA6NDX5 716 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 RHPN2P1A8MT19 583 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 SNAP91O60641 907 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 PCK1P35558 622 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 PMS2P54278 862 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 PEX6Q13608 980 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 KYNUQ16719 465 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 GLE1Q53GS7 698 aaKnown RBP9.21□□□□□ -0.93
HDAC9-229ENST00000622668 MROH9Q5TGP6 573 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 C11orf63Q6NUN7 778 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 TMEM173Q86WV6 379 aaPredicted RBP9.21□□□□□ -0.93
HDAC9-229ENST00000622668 KRT222Q8N1A0 295 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 COG1Q8WTW3 980 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 UHRF1Q96T88 793 aaPredicted RBP9.21□□□□□ -0.93
HDAC9-229ENST00000622668 TBL1YQ9BQ87 522 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 RAD18Q9NS91 495 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 ELOVL2Q9NXB9 296 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 SPACA6W5XKT8 324 aa9.21□□□□□ -0.93
HDAC9-229ENST00000622668 PSMD12O00232 456 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 NDUFAB1O14561 156 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 VIPP01282 170 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 RPN2P04844 631 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 SLC8A1P32418 973 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 AARSP49588 968 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 CSTF1Q05048 431 aaKnown RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 SLC20A2Q08357 652 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 DHCR24Q15392 516 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 AMZ1Q400G9 498 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 E4F1Q66K89 784 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ZNF470Q6ECI4 717 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 C3orf58Q8NDZ4 430 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 PANX3Q96QZ0 392 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 NAT9Q9BTE0 207 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 GPR174Q9BXC1 333 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 OSBPL6Q9BZF3 934 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 KATNBL1Q9H079 304 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 SDCBP2Q9H190 292 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 WDR41Q9HAD4 459 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 PCDH18Q9HCL0 1135 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 NSMCE4AQ9NXX6 385 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ZNF212Q9UDV6 495 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 NOVA2Q9UNW9 492 aaKnown RBP9.21□□□□□ -0.94
HDAC9-229ENST00000622668 RAI2Q9Y5P3 530 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 STYXL1Q9Y6J8 313 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 ISM1B1AKI9 464 aa9.21□□□□□ -0.94
HDAC9-229ENST00000622668 DYNC1I1O14576 645 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms