RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 NEMP1O14524 444 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 SLC22A2O15244 555 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 AP1G1O43747 822 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 SBK3P0C264 359 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 TPH1P17752 444 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 CHN2P52757 468 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 GRM3Q14832 879 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 ARL13AQ5H913 290 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 ITPRIPL1Q6GPH6 555 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 FBXL19Q6PCT2 694 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 CPSF7Q8N684 471 aaKnown RBP17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 VPS28Q9UK41 221 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 FBXW11Q9UKB1 542 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 PACSIN3Q9UKS6 424 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 DTNAQ9Y4J8 743 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 TSC2P49815 1807 aa17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 TRIP12Q14669 1992 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-205ENST00000587327 CAPN8A6NHC0 703 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 CABYRO75952 493 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 NFKB1P19838 968 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 NMBRP28336 390 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 GRIA2P42262 883 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PRKAA2P54646 552 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 CYLC2Q14093 348 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 CCL14Q16627 93 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 ZC3HC1Q86WB0 502 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PPP1R36Q96LQ0 422 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 TSPAN18Q96SJ8 248 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 CDRT15Q96T59 188 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 ACSS2Q9NR19 701 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 HAS3O00219 553 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 TXNDC9O14530 226 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 GRID2O43424 1007 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PIGNO95427 931 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 CCR10P46092 362 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PSEN2P49810 448 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 NAGLUP54802 743 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 MAP3K7CLP57077 242 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 GALNT2Q10471 571 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 IRF5Q13568 498 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 SNX17Q15036 470 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PIGGQ5H8A4 983 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 GCNAQ96QF7 691 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 VAT1Q99536 393 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 APBA2Q99767 749 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 ZNF385DQ9H6B1 395 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 NSMCE4AQ9NXX6 385 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 ZDHHC2Q9UIJ5 367 aa17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-205ENST00000587327 TREHO43280 583 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 DENRO43583 198 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 AXLP30530 894 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 ADSLP30566 484 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 THOP1P52888 689 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 CDH17Q12864 832 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 DYNC1I2Q13409 638 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 ZNF423Q2M1K9 1284 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 BNC2Q6ZN30 1099 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 TMC7Q7Z402 723 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 LCA5Q86VQ0 697 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 STON2Q8WXE9 905 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 TSNARE1Q96NA8 513 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 HAPLN3Q96S86 360 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 MED10Q9BTT4 135 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 ULBP1Q9BZM6 244 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 RHOJQ9H4E5 214 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 UBP1Q9NZI7 540 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 VTI1BQ9UEU0 232 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 C9IYK1 514 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 SLCO1B7G3V0H7 640 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 AP1G2O75843 785 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 DDHD2O94830 711 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 SLC35E2BP0CK96 405 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 SAT1P21673 171 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 GJA9P57773 515 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 FLOT2Q14254 428 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 USP10Q14694 798 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 TLR1Q15399 786 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 CST9Q5W186 159 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 MARVELD2Q8N4S9 558 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 STYXQ8WUJ0 223 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 DCUN1D1Q96GG9 259 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 KIFC1Q9BW19 673 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 G3BP2Q9UN86 482 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 COMMD3-BMI1R4GMX3 469 aa17.12■□□□□ 0.33
PRKCSH-205ENST00000587327 C15orf38-AP3S2A0A0A6YYH1 394 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 AP3B1O00203 1094 aa17.11■□□□□ 0.33
PRKCSH-205ENST00000587327 PHGDHO43175 533 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms