RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 PRAMEP78395 509 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 TRAP1Q12931 704 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 ZBTB49Q6ZSB9 765 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 ACOT1Q86TX2 421 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 DNERQ8NFT8 737 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 SLC35F5Q8WV83 523 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 IARS2Q9NSE4 1012 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 TUBA8Q9NY65 449 aaPredicted RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 KLHL8Q9P2G9 620 aaPredicted RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 CNOT6Q9ULM6 557 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 TRPC5OSA6NMA1 111 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 FAM155AB1AL88 458 aaPredicted RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 GABBR2O75899 941 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 HMOX2P30519 316 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 NAA20P61599 178 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 MBTD1Q05BQ5 628 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 RALGDSQ12967 914 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 STX5Q13190 355 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 ZBED5Q49AG3 693 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 KCTD21Q4G0X4 260 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 TREML2Q5T2D2 321 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 ELMSAN1Q6PJG2 1045 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 CYP2R1Q6VVX0 501 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 EXOC8Q8IYI6 725 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 RSPH1Q8WYR4 309 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 SLCO4A1Q96BD0 722 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 C12orf43Q96C57 262 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 MFSD3Q96ES6 412 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 VPS50Q96JG6 964 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 ASB7Q9H672 318 aa14.41□□□□□ -0.1
SRP54-202ENST00000546080 RUVBL2Q9Y230 463 aaKnown RBP14.41□□□□□ -0.1
SRP54-202ENST00000546080 IGKV6-21A0A0C4DH24 114 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TMEM221A6NGB7 291 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 ZNF701M0R085 212 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 SBK3P0C264 359 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 PORP16435 677 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 HMGB2P26583 209 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 HADHAP40939 763 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 RBP5P82980 135 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TNFAIP2Q03169 654 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TMEM62Q0P6H9 643 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 FRG1Q14331 258 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 GRM3Q14832 879 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 MAPRE2Q15555 327 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 REP15Q6BDI9 236 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 HMBOX1Q6NT76 420 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 FAM131BQ86XD5 332 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 PSTKQ8IV42 348 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 TMEM151AQ8N4L1 468 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 CCNYL1Q8N7R7 359 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 UHRF1Q96T88 793 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 C1QTNF1Q9BXJ1 281 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 PRDM12Q9H4Q4 367 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 MINDY3Q9H8M7 445 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 RCOR3Q9P2K3 495 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 ADAMTS5Q9UNA0 930 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TCRBV3S1A0A5B6 114 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 TMEM233B4DJY2 109 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 PSMD12O00232 456 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 TRIM24O15164 1050 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 PHGDHO43175 533 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 STAMBPO95630 424 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 AP2A1O95782 977 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 SLC5A3P53794 718 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 HMGCS2P54868 508 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 USP10Q14694 798 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 SOWAHAQ2M3V2 549 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 NHSL2Q5HYW2 709 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 RWDD4Q6NW29 188 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 TTC33Q6PID6 262 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 SLC26A9Q7LBE3 791 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 ZNF786Q8N393 782 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 STYXQ8WUJ0 223 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 KCTD4Q8WVF5 259 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 THAP11Q96EK4 314 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 DUS3LQ96G46 650 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 APBA2Q99767 749 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 DNAI2Q9GZS0 605 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 HIPK3Q9H422 1215 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 FAM124BQ9H5Z6 455 aaPredicted RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 TRPC7Q9HCX4 862 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 SPAG4Q9NPE6 437 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 DUS2Q9NX74 493 aaKnown RBP14.4□□□□□ -0.1
SRP54-202ENST00000546080 DPP3Q9NY33 737 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 FZD10Q9ULW2 581 aa14.4□□□□□ -0.1
SRP54-202ENST00000546080 ZBTB42B2RXF5 422 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 SOCS2O14508 198 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 SDHDO14521 159 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 AKAP10O43572 662 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 TIPRLO75663 272 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 LCP1P13796 627 aa14.39□□□□□ -0.11
SRP54-202ENST00000546080 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
SRP54-202ENST00000546080 CKMT2P17540 419 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms