RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PCDHGB4Q9UN71 923 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 PCDHGB5Q9Y5G0 923 aa14.3□□□□□ -0.12
UBE3B-210ENST00000539599 CCDC189A1A4V9 331 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 SMIM24O75264 130 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 KLHL2O95198 593 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 SLC35E2BP0CK96 405 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 GRK2P25098 689 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 PLK1P53350 603 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 CRYBB1P53674 252 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 MSLNQ13421 630 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 SEPT6Q14141 434 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 AGMOQ6ZNB7 445 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 ZC3HC1Q86WB0 502 aaKnown RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 FSTL5Q8N475 847 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 SPDYE1Q8NFV5 336 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 DQX1Q8TE96 717 aaKnown RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 GATA6Q92908 595 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 C1QTNF1Q9BXJ1 281 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 TCF7L2Q9NQB0 619 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 FAM105AQ9NUU6 356 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 XPR1Q9UBH6 696 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 TRIM13O60858 407 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 GJB3O75712 270 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 B3GAT3O94766 335 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 TOMM70O94826 608 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 HNRNPLP14866 589 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 TSPAN8P19075 237 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 ARNTP27540 789 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 LRPAP1P30533 357 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 PSEN1P49768 467 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 MAXP61244 160 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 GALNT2Q10471 571 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 CNGA3Q16281 694 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 STXBP5Q5T5C0 1151 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 PTAR1Q7Z6K3 402 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-210ENST00000539599 OR10T2Q8NGX3 314 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 ANKRD27Q96NW4 1050 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 NAT9Q9BTE0 207 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 TNFRSF12AQ9NP84 129 aa14.29□□□□□ -0.12
UBE3B-210ENST00000539599 THP07101 528 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 DPP6P42658 865 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 TRIP10Q15642 601 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 DHDDSQ86SQ9 333 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 HDAC11Q96DB2 347 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 C1orf21Q9H246 121 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 OXSMQ9NWU1 459 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 SF3B1O75533 1304 aaKnown RBP eCLIP14.28□□□□□ -0.12
UBE3B-210ENST00000539599 MGEA5O60502 916 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 LYNP07948 512 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 INSCQ1MX18 579 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 CCDC153Q494R4 210 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 RBM20Q5T481 1227 aaKnown RBP14.28□□□□□ -0.12
UBE3B-210ENST00000539599 PGM2L1Q6PCE3 622 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 LSMEM2Q8N112 164 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 GPR152Q8TDT2 470 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 RCN3Q96D15 328 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 SCOCQ9UIL1 159 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 NEU3Q9UQ49 428 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 MYOCOSA0A1B0GUC4 107 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 HAS3O00219 553 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 TXNDC9O14530 226 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 GRID2O43424 1007 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 DLX3O60479 287 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 ALOX15P16050 662 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-210ENST00000539599 KCNA5P22460 613 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 PIK3R1P27986 724 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 AXLP30530 894 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 RAB41Q5JT25 222 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 TSTD2Q5T7W7 516 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 TFAP2DQ7Z6R9 452 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 ARHGAP12Q8IWW6 846 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 NTAN1Q96AB6 310 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 EPAS1Q99814 870 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 DNAI2Q9GZS0 605 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 CNGB3Q9NQW8 809 aa14.28□□□□□ -0.12
UBE3B-210ENST00000539599 GNAT1P11488 350 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 ENO3P13929 434 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-210ENST00000539599 SLC1A2P43004 574 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 FAM110CQ1W6H9 321 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 GDF6Q6KF10 455 aaPredicted RBP14.27□□□□□ -0.12
UBE3B-210ENST00000539599 TMC7Q7Z402 723 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 ACTRT2Q8TDY3 377 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 DPF3Q92784 378 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 MCMBPQ9BTE3 642 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 CHST12Q9NRB3 414 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 TLK1Q9UKI8 766 aa14.27□□□□□ -0.12
UBE3B-210ENST00000539599 CAPN8A6NHC0 703 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 H3BNX3 289 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 CCNT2O60583 730 aaKnown RBP14.27□□□□□ -0.13
UBE3B-210ENST00000539599 CHRNA1P02708 482 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 HLA-DQB2P05538 268 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 ETS2P15036 469 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 XRCC1P18887 633 aaPredicted RBP14.27□□□□□ -0.13
UBE3B-210ENST00000539599 GPR15P49685 360 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 THOP1P52888 689 aa14.27□□□□□ -0.13
UBE3B-210ENST00000539599 MRPS22P82650 360 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms