RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 MAFKO60675 156 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ZMPSTE24O75844 475 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 NEBLO76041 1014 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 BAG2O95816 211 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CYP11A1P05108 521 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 GABRB3P28472 473 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CCR1P32246 355 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 GCKP35557 465 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CCR10P46092 362 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 MPP1Q00013 466 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TRIM32Q13049 653 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 PEX6Q13608 980 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 SDHAF4Q5VUM1 108 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 PHTF2Q8N3S3 785 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 SPATA6LQ8N4H0 392 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 MAPK15Q8TD08 544 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TSNARE1Q96NA8 513 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 FCRL5Q96RD9 977 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 HAPLN3Q96S86 360 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ACE2Q9BYF1 805 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CATSPERBQ9H7T0 1116 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CYP4F11Q9HBI6 524 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 DSEQ9UL01 958 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 NEU3Q9UQ49 428 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 GOLGA8QA0A0J9YX86 632 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 GOLGA8OA6NCC3 632 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 GOLGA8NF8WBI6 632 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 M0QZQ0 153 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 MATN3O15232 486 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ANXA9O76027 345 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 IGLV3-25P01717 112 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ASGR1P07306 291 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CHRNGP07510 517 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ALOX15P16050 662 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CYP2C18P33260 490 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 EPHB1P54762 984 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CRHR2Q13324 411 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF460Q14592 562 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 LPIN1Q14693 890 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TRMT5Q32P41 509 aaKnown RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ANO7Q6IWH7 933 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 EPGNQ6UW88 154 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 SCD5Q86SK9 330 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 C14orf80Q86SX3 495 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 LMNTD2Q8IXW0 634 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 PPFIBP2Q8ND30 876 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 KCTD4Q8WVF5 259 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TRIB2Q92519 343 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 TTC1Q99614 292 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 MCMBPQ9BTE3 642 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 FTHL17Q9BXU8 183 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 ARHGAP39Q9C0H5 1083 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 NMUR1Q9HB89 426 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 OXSMQ9NWU1 459 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 SLC2A6Q9UGQ3 507 aa11.38□□□□□ -0.59
CHMP3-209ENST00000494623 G3BP2Q9UN86 482 aaKnown RBP11.38□□□□□ -0.59
CHMP3-209ENST00000494623 CACNG3O60359 315 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SORBS2O94875 1100 aaKnown RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 GRIA4P48058 902 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ACTR3P61158 418 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 GRIK3Q13003 919 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 EIF4EBP2Q13542 120 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 BLMHQ13867 455 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MAPRE1Q15691 268 aaKnown RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CNGA3Q16281 694 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 BRMS1LQ5PSV4 323 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MFSD14CQ5VZR4 134 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 DENND5AQ6IQ26 1287 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CMTM5Q96DZ9 223 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 GPR22Q99680 433 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TRIM62Q9BVG3 475 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ILKAPQ9H0C8 392 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 RHOJQ9H4E5 214 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF212Q9UDV6 495 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 GABRQQ9UN88 632 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 A0A1W2PQH9 124 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 TMEM114B3SHH9 223 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 NEMP1O14524 444 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SKAP2O75563 359 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 HLA-DQB2P05538 268 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CYBAP13498 195 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ANPEPP15144 967 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 ACADSP16219 412 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 MPSTP25325 297 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 PAPOLAP51003 745 aaKnown RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 RAB27AP51159 221 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SEPT6Q14141 434 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 KCNA10Q16322 511 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 PCSK7Q16549 785 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 SLC39A12Q504Y0 691 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 PPHLN1Q8NEY8 458 aaKnown RBP11.37□□□□□ -0.59
CHMP3-209ENST00000494623 OR52B2Q96RD2 323 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 C1QTNF1Q9BXJ1 281 aa11.37□□□□□ -0.59
CHMP3-209ENST00000494623 FSD1LQ9BXM9 530 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms