RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ITGALP20701 1170 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 PBLDP30039 288 aaPredicted RBP10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 RGS1Q08116 209 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 DUOXA2Q1HG44 320 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 PREX2Q70Z35 1606 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 GOLM1Q8NBJ4 401 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 FAR1Q8WVX9 515 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM120BQ96EK7 910 aaKnown RBP10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.46□□□□□ -0.738e-7■■□□□ 14.2
SPTBN1-201ENST00000333896 CRLS1Q9UJA2 301 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 CLEC4AQ9UMR7 237 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 CFL2Q9Y281 166 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 PCDHB2Q9Y5E7 798 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 RPS2P15880 293 aaKnown RBP10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 MAB21L1Q13394 359 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 ZNF181Q2M3W8 571 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 CLNKQ7Z7G1 428 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 FAM136AQ96C01 138 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 RNF145Q96MT1 663 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 NEUROD4Q9HD90 331 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 PCDHGA11Q9Y5H2 935 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 PMF1-BGLAPU3KQ54 211 aa10.46□□□□□ -0.73
SPTBN1-201ENST00000333896 ZFC3H1O60293 1989 aaKnown RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZSCAN5CA6NGD5 496 aaPredicted RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 IL18R1Q13478 541 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 RC3H1Q5TC82 1133 aaKnown RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF517Q6ZMY9 492 aaPredicted RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF767PQ75MW2 155 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ARL5BQ96KC2 179 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 REEP1Q9H902 201 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 LY9Q9HBG7 655 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 KLHL28Q9NXS3 571 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 STK32BQ9NY57 414 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 PRKCBP05771 671 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 CD151P48509 253 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 EIF4A1P60842 406 aaKnown RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 RAB5BP61020 215 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 KLHDC7AQ5VTJ3 777 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 GALNTL5Q7Z4T8 443 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 SIRT2Q8IXJ6 389 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 TMEM132CQ8N3T6 1108 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF276Q8N554 614 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 ZNF655Q8N720 491 aaPredicted RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 RHBDF1Q96CC6 855 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 PPRC1Q5VV67 1664 aaKnown RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 E7ENX8 843 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 KMOO15229 486 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 GRAP2O75791 330 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 PRH1P02810 166 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 A1BGP04217 495 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 HNRNPFP52597 415 aaKnown RBP10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 KCNA10Q16322 511 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 SERAC1Q96JX3 654 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 TEKT5Q96M29 485 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 CDC42BPGQ6DT37 1551 aa10.46□□□□□ -0.74
SPTBN1-201ENST00000333896 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 ASB14A6NK59 587 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 BBIP1A8MTZ0 92 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 KIF28PB7ZC32 967 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PCSK2P16519 638 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 LSM3P62310 102 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CXXC5Q7LFL8 322 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 TMC7Q7Z402 723 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 NT5DC4Q86YG4 428 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PARP8Q8N3A8 854 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CCDC17Q96LX7 622 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 COPS4Q9BT78 406 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 RIOK2Q9BVS4 552 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CATSPERBQ9H7T0 1116 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 ZSWIM5Q9P217 1185 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 UGGT1Q9NYU2 1555 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 DCXO43602 365 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CLK2P49760 499 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 TTLL9Q3SXZ7 439 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 C10orf107Q8IVU9 208 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PHC2Q8IXK0 858 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM71DQ8N9W8 422 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 FAM47BQ8NA70 645 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 NEK7Q8TDX7 302 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 TUBA1CQ9BQE3 449 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 HERC2P3Q9BVR0 1158 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 SLA2Q9H6Q3 261 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 FER1L6Q2WGJ9 1857 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 DIDO1Q9BTC0 2240 aaKnown RBP10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MPZL2O60487 215 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MAGEA12P43365 314 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 PRELPP51888 382 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 GRTP1Q5TC63 336 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 FAXDC2Q96IV6 333 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 CPNE1Q99829 537 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 GMIPQ9P107 970 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 MAB21L2Q9Y586 359 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 TRIM38O00635 465 aa10.45□□□□□ -0.74
SPTBN1-201ENST00000333896 NR4A1P22736 598 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms