RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PEAR1Q5VY43 1037 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-228ENST00000618469 LINGO4Q6UY18 593 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 ZNF783Q6ZMS7 281 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 Q6ZVU0 165 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 NLRP14Q86W24 1093 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 RGL4Q8IZJ4 473 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 SH2D3CQ8N5H7 860 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 GANCQ8TET4 914 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 FRS2Q8WU20 508 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 FOXJ1Q92949 421 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 SPON2Q9BUD6 331 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 ATP13A1Q9HD20 1204 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 PILRBQ9UKJ0 227 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 FZD10Q9ULW2 581 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 HS3ST2Q9Y278 367 aa16.37■□□□□ 0.21
BRCA1-228ENST00000618469 A0A087X0T9 212 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 TMEM191CA6NGB0 347 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 CBX4O00257 560 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 ATP9BO43861 1147 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 CREB3O43889 395 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 BNIP3LO60238 219 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 CFIP05156 583 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 FAM228BP0C875 321 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 C7P10643 843 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 SRCP12931 536 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 GLDCP23378 1020 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 ACSL1P33121 698 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 HOXD12P35452 270 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 MAPKAPK2P49137 400 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 VASPP50552 380 aaPredicted RBP16.36■□□□□ 0.21
BRCA1-228ENST00000618469 GNA12Q03113 381 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 DLG2Q15700 870 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 SYCP2LQ5T4T6 812 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 VSTM4Q8IW00 320 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 CHCHD4Q8N4Q1 142 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 ATP11CQ8NB49 1132 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 OR2I1PQ8NGU4 316 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 FNIP1Q8TF40 1166 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 SNX19Q92543 992 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 ZNF419Q96HQ0 510 aaPredicted RBP16.36■□□□□ 0.21
BRCA1-228ENST00000618469 EPAS1Q99814 870 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 BTBD1Q9H0C5 482 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 MRPL47Q9HD33 250 aaKnown RBP16.36■□□□□ 0.21
BRCA1-228ENST00000618469 NDFIP2Q9NV92 336 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 TMEM248Q9NWD8 314 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 GPATCH2LQ9NWQ4 482 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 SERGEFQ9UGK8 458 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 DNAI1Q9UI46 699 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 SCML1Q9UN30 329 aa16.36■□□□□ 0.21
BRCA1-228ENST00000618469 CHD5Q8TDI0 1954 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 A0A1W2PP55 124 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 SEMA4FO95754 770 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 ADH1BP00325 375 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 MT-CO1P00395 513 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 IL1BP01584 269 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 TPM1P09493 284 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 EPHB2P29323 1055 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 L1CAMP32004 1257 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 ACVRL1P37023 503 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 NUMA1Q14980 2115 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 WDR45BQ5MNZ6 344 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 C22orf39Q6P5X5 142 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 USP30Q70CQ3 517 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 OR8D1Q8WZ84 308 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 PEBP4Q96S96 227 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 FAM129BQ96TA1 746 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 THAP2Q9H0W7 228 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 C6orf106Q9H6K1 298 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-228ENST00000618469 FBXL12Q9NXK8 326 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 PCSK1NQ9UHG2 260 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 EVLQ9UI08 416 aaPredicted RBP16.35■□□□□ 0.21
BRCA1-228ENST00000618469 AP4E1Q9UPM8 1137 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 NCKAP1Q9Y2A7 1128 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 NEUROG3Q9Y4Z2 214 aa16.35■□□□□ 0.21
BRCA1-228ENST00000618469 K7ERQ8 282 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RAMP2O60895 175 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 MFAP3LO75121 409 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RNASEH2AO75792 299 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RNF8O76064 485 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 ENGP17813 658 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 MAOBP27338 520 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 HNRNPH3P31942 346 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 SLC8A1P32418 973 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 ETFBP38117 255 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 EIF4A3P38919 411 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 SERPINH1P50454 418 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 TPI1P60174 286 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 CCDC122Q5T0U0 273 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RETSATQ6NUM9 610 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 ALKBH5Q6P6C2 394 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RABEPKQ7Z6M1 372 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 DSG4Q86SJ6 1040 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 ZCCHC9Q8N567 271 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 RTL3Q8N8U3 475 aaKnown RBP16.34■□□□□ 0.21
BRCA1-228ENST00000618469 CADM4Q8NFZ8 388 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 CCDC114Q96M63 670 aa16.34■□□□□ 0.21
BRCA1-228ENST00000618469 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms