RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ADHFE1Q8IWW8 467 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 OVCA2Q8WZ82 227 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 ATP6V1E2Q96A05 226 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 ZNF845Q96IR2 970 aaPredicted RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 TWNKQ96RR1 684 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 KRT84Q9NSB2 600 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 CNPY2Q9Y2B0 182 aa5.73□□□□□ -1.49
VRK1-203ENST00000555067 TCF20Q9UGU0 1960 aaKnown RBP5.73□□□□□ -1.49
VRK1-203ENST00000555067 LACTBL1A8MY62 500 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 DKC1O60832 514 aaKnown RBP eCLIP5.72□□□□□ -1.49
VRK1-203ENST00000555067 SOX2P48431 317 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 AARSP49588 968 aaKnown RBP eCLIP5.72□□□□□ -1.49
VRK1-203ENST00000555067 PGGT1BP53609 377 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 ACTR2P61160 394 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 BFSP2Q13515 415 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 ARL6IP4Q66PJ3 421 aaKnown RBP5.72□□□□□ -1.49
VRK1-203ENST00000555067 CRTC1Q6UUV9 634 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 KIAA0408Q6ZU52 694 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 RFX6Q8HWS3 928 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 OR52L2PQ8NGH6 319 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 RADILQ96JH8 1075 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 ERVK-5Q9HDB9 667 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 PRDM8Q9NQV8 689 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 IPO11Q9UI26 975 aaKnown RBP5.72□□□□□ -1.49
VRK1-203ENST00000555067 VPS28Q9UK41 221 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 EMSYQ7Z589 1322 aa5.72□□□□□ -1.49
VRK1-203ENST00000555067 A0A0G2JK05 382 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 SPTLC2O15270 562 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 PTP4A3O75365 173 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 STARD3NLO95772 234 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 TK1P04183 234 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 NPPBP16860 134 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 MST1P26927 711 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 MAPK4P31152 587 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 AP2B1P63010 937 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 GAB1Q13480 694 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 CUL4AQ13619 759 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 PSMD6Q15008 389 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 MAPKAPK3Q16644 382 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 MAP3K21Q5TCX8 1036 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 RAP1GAP2Q684P5 730 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 BBS12Q6ZW61 710 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 RRAGAQ7L523 313 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 SLC44A2Q8IWA5 706 aaPredicted RBP5.71□□□□□ -1.5
VRK1-203ENST00000555067 ZNF713Q8N859 430 aaPredicted RBP5.71□□□□□ -1.5
VRK1-203ENST00000555067 CCDC191Q8NCU4 936 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 SLF1Q9BQI6 1058 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 TMEM204Q9BSN7 226 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 TRIM2Q9C040 744 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 PCDHAC1Q9H158 963 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 THSD1Q9NS62 852 aa5.71□□□□□ -1.5
VRK1-203ENST00000555067 CWC25Q9NXE8 425 aaPredicted RBP5.71□□□□□ -1.5
VRK1-203ENST00000555067 ZMYND8Q9ULU4 1186 aaPredicted RBP5.71□□□□□ -1.5
VRK1-203ENST00000555067 TDRD9Q8NDG6 1382 aaKnown RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 KIR2DS5A0A0G2JLQ3 304 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 TMEM272A0A1B0GTI8 110 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ERVV-2B6SEH9 535 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 H0Y3Z8 333 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 KIR2DS3K7RE56 304 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 KCNQ3O43525 872 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 DNPH1O43598 174 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 UGDHO60701 494 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 TMEM63AO94886 807 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 SGPL1O95470 568 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ENO1P06733 434 aaKnown RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 HSP90AB1P08238 724 aaKnown RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 AKR1A1P14550 325 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 SLC8A1P32418 973 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ZNF84P51523 738 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 CCR9P51686 369 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ARF3P61204 181 aaPredicted RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 KRT83P78385 493 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ARF1P84077 181 aaKnown RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 SEMA3BQ13214 749 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 TMEM196Q5HYL7 178 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 NFRKBQ6P4R8 1299 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 R3HCC1LQ7Z5L2 792 aaKnown RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 TEX11Q8IYF3 940 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 NGEFQ8N5V2 710 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 OR6Y1Q8NGX8 325 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 CEP70Q8NHQ1 597 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 B4GALNT2Q8NHY0 566 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 CREB3L4Q8TEY5 395 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 ZFPM2Q8WW38 1151 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 GLMPQ8WWB7 406 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 SDCCAG3Q96C92 435 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 TRAPPC9Q96Q05 1148 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 CTAGE1Q96RT6 745 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 MPHOSPH8Q99549 860 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 BAG1Q99933 345 aaPredicted RBP5.7□□□□□ -1.5
VRK1-203ENST00000555067 RTKNQ9BST9 563 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 HTATIP2Q9BUP3 242 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 TWSG1Q9GZX9 223 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 FZD3Q9NPG1 666 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 CYP46A1Q9Y6A2 500 aa5.7□□□□□ -1.5
VRK1-203ENST00000555067 EME2A4GXA9 379 aaPredicted RBP5.69□□□□□ -1.5
VRK1-203ENST00000555067 KRT86O43790 486 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 KRT10P13645 584 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 IDEP14735 1019 aa5.69□□□□□ -1.5
VRK1-203ENST00000555067 EGR1P18146 543 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms