RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 GBE1Q04446 702 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 BFSP2Q13515 415 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 NEDD8Q15843 81 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 EPC2Q52LR7 807 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 LINC00523Q86TU6 105 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ARHGEF19Q8IW93 802 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 PDIK1LQ8N165 341 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 DEPDC7Q96QD5 511 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TWNKQ96RR1 684 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 REEP2Q9BRK0 252 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 HOMER2Q9NSB8 354 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 PACSIN3Q9UKS6 424 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 CNOT6Q9ULM6 557 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 CLIC2O15247 247 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 LYPLA1O75608 230 aaPredicted RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 BMP3P12645 472 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 PRKCHP24723 683 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 GRK3P35626 688 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ALDH7A1P49419 539 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 NDST1P52848 882 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TNFAIP2Q03169 654 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 GAD2Q05329 585 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 NFX1Q12986 1120 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 CEP55Q53EZ4 464 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ZNF544Q6NX49 715 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 LYPD8Q6UX82 237 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ZCCHC23Q6ZST2 131 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ERMP1Q7Z2K6 904 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 SNX29P2Q8IUI4 249 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ADGRG5Q8IZF4 528 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TDRD5Q8NAT2 981 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 RHOXF1Q8NHV9 184 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TMEM174Q8WUU8 243 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 DDX1Q92499 740 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 MBOAT7Q96N66 472 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 RUSC1Q9BVN2 902 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 CHID1Q9BWS9 393 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 MTMR12Q9C0I1 747 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 LHPPQ9H008 270 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 DPEP3Q9H4B8 488 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 GREM2Q9H772 168 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 SCPEP1Q9HB40 452 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TOPORSQ9NS56 1045 aaPredicted RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 ACOXLQ9NUZ1 547 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 AP3M1Q9Y2T2 418 aa9.36□□□□□ -0.91
LINC01140-201ENST00000461990 MYH9P35579 1960 aaKnown RBP9.36□□□□□ -0.91
LINC01140-201ENST00000461990 TRDMT1O14717 391 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 TOP3BO95985 862 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 PGK2P07205 417 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CAPN1P07384 714 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 IL12AP29459 219 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 PLA2G16P53816 162 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SMARCB1Q12824 385 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 BNIP2Q12982 314 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CTF1Q16619 201 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 BROXQ5VW32 411 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 METTL2BQ6P1Q9 378 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SYCE2Q6PIF2 218 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 VN1R5Q7Z5H4 357 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 GALNT12Q8IXK2 581 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 IL17RDQ8NFM7 739 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 BEST2Q8NFU1 509 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 OR5H6Q8NGV6 325 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLC35B2Q8TB61 432 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SGCDQ92629 289 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 TOE1Q96GM8 510 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 ACAT2Q9BWD1 397 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 NOL11Q9H8H0 719 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 VWA7Q9Y334 891 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SNX13Q9Y5W8 968 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CSPG5O95196 566 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 JUNP05412 331 aaKnown RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SERPINB10P48595 397 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 PKNOX1P55347 436 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 FSTL1Q12841 308 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLC10A2Q12908 348 aaPredicted RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 BFSP1Q12934 665 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 ESCO2Q56NI9 601 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLC9A4Q6AI14 798 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CCBE1Q6UXH8 406 aaPredicted RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 DGLUCYQ7Z3D6 616 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SPRED1Q7Z699 444 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLCO6A1Q86UG4 719 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CDR2LQ86X02 465 aaPredicted RBP9.35□□□□□ -0.91
LINC01140-201ENST00000461990 ADGRF2Q8IZF7 708 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 CNTD1Q8N815 330 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SHC3Q92529 594 aa9.35□□□□□ -0.91
LINC01140-201ENST00000461990 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms