RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SLC12A8A0AV02 714 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 ANKRD63C9JTQ0 380 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 MLYCDO95822 493 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 LTA4HP09960 611 aaKnown RBP13.54□□□□□ -0.24
SNED1-205ENST00000405547 FKBP1AP62942 108 aaKnown RBP13.54□□□□□ -0.24
SNED1-205ENST00000405547 TMEM216Q9P0N5 145 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 TRIM38O00635 465 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 TGDSO95455 350 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 TMEM161BQ8NDZ6 487 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 ST13P5Q8NFI4 369 aaPredicted RBP13.54□□□□□ -0.24
SNED1-205ENST00000405547 ELMO3Q96BJ8 720 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 HPS4Q9NQG7 708 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 MICAL3Q7RTP6 2002 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNED1-205ENST00000405547 HOXC6P09630 235 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 DSG3P32926 999 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 PFKFB4Q16877 469 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 RBM44Q6ZP01 1051 aaKnown RBP13.54□□□□□ -0.24
SNED1-205ENST00000405547 SFRP1Q8N474 314 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 WNT8BQ93098 351 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SERHL2Q9H4I8 314 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 ACP6Q9NPH0 428 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SERHLQ9NQF3 203 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SCAF8Q9UPN6 1271 aaKnown RBP13.54□□□□□ -0.24
SNED1-205ENST00000405547 DMTF1Q9Y222 760 aa13.54□□□□□ -0.24
SNED1-205ENST00000405547 SPATA31A6Q5VVP1 1343 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 EPN2O95208 641 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ADSSP30520 456 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PSME3P61289 254 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 BFSP2Q13515 415 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ZACNQ401N2 412 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 FKBP1CQ5VVH2 108 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 FAM81AQ8TBF8 368 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PURBQ96QR8 312 aaKnown RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 CNTNAP2Q9UHC6 1331 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PARNO95453 639 aaKnown RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 CCDC166P0CW27 439 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 HPCAL1P37235 193 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 RHOAP61586 193 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ZNF605Q86T29 641 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 OSMRQ99650 979 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 RTKNQ9BST9 563 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 CNTRLQ7Z7A1 2325 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 BTN3A1O00481 513 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 NBNO60934 754 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 UQCRBP14927 111 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 CYP2B6P20813 491 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 TPP2P29144 1249 aaPredicted RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 HGSNATQ68CP4 663 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 OVOS1Q6IE37 1185 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 MBOAT7Q96N66 472 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 DEPDC7Q96QD5 511 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 COQ7Q99807 217 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 CLEC4MQ9H2X3 399 aaPredicted RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PIPSLA2A3N6 862 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 HOXB6P17509 224 aaKnown RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 S100A3P33764 101 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 FLT3P36888 993 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 IL27RAQ6UWB1 636 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 OR52K1Q8NGK4 314 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 TKTL2Q9H0I9 626 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 CBX4O00257 560 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 LTFP02788 710 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ARHGAP15Q53QZ3 475 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PQLC1Q8N2U9 271 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 TMEM169Q96HH4 297 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 HSFY1Q96LI6 401 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PANX3Q96QZ0 392 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 KLHL28Q9NXS3 571 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 KPNA6O60684 536 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 USP12O75317 370 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 RNF180Q86T96 592 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 SERAC1Q96JX3 654 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 LEF1Q9UJU2 399 aaPredicted RBP13.53□□□□□ -0.24
SNED1-205ENST00000405547 CDH9Q9ULB4 789 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 PLLPQ9Y342 182 aa13.53□□□□□ -0.24
SNED1-205ENST00000405547 H3BNX3 289 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 ADRB2P07550 413 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 VCLP18206 1134 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 CLCN5P51795 746 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 C15orf59Q2T9L4 293 aaPredicted RBP13.52□□□□□ -0.24
SNED1-205ENST00000405547 TEKT5Q96M29 485 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms