RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 SATL1Q86VE3 508 aa19.88■□□□□ 0.77
COL13A1-205ENST00000398978 GPRC5AQ8NFJ5 357 aa19.88■□□□□ 0.77
COL13A1-205ENST00000398978 CRTAC1Q9NQ79 661 aa19.88■□□□□ 0.77
COL13A1-205ENST00000398978 ZSWIM8A7E2V4 1837 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 ATP5BP06576 529 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 SMIM10L2AP0DMW4 78 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 SMIM10L2BP0DMW5 78 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 CYP2B6P20813 491 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 GABRB3P28472 473 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 BTKQ06187 659 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 PAN2Q504Q3 1202 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DSELQ8IZU8 1212 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 TRAPPC9Q96Q05 1148 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 ILKAPQ9H0C8 392 aaPredicted RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 CASS4Q9NQ75 786 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DNAJB4Q9UDY4 337 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DERAQ9Y315 318 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 NEMP2A6NFY4 417 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 TREHO43280 583 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DPP6P42658 865 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 CDK7P50613 346 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 MS4A2Q01362 244 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 FOLH1Q04609 750 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 PPIL2Q13356 520 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 PDK3Q15120 406 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 LIN52Q52LA3 116 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 FSCBQ5H9T9 825 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 RWDD4Q6NW29 188 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 ACAD11Q709F0 780 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 CLEC14AQ86T13 490 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 TMA16Q96EY4 203 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 COPS7BQ9H9Q2 264 aaPredicted RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 ADARB2Q9NS39 739 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 OXSMQ9NWU1 459 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 TLK1Q9UKI8 766 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DFFAO00273 331 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 MAGEA12P43365 314 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 CCNA1P78396 465 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 DGKDQ16760 1214 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 KBTBD6Q86V97 674 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 HNRNPABQ99729 332 aaKnown RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 NPAS2Q99743 824 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 TKTL2Q9H0I9 626 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 VTA1Q9NP79 307 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 RCOR3Q9P2K3 495 aaPredicted RBP19.87■□□□□ 0.77
COL13A1-205ENST00000398978 SLC2A6Q9UGQ3 507 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 IPPQ9Y573 584 aa19.87■□□□□ 0.77
COL13A1-205ENST00000398978 COL1A2P08123 1366 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 CD4P01730 458 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 SPATA31D3P0C874 917 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 TFEBP19484 476 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 ALDH1A3P47895 512 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 DBN1Q16643 649 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 PAOXQ6QHF9 649 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 SPATA31D4Q6ZUB0 917 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 TMC7Q7Z402 723 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 RNF135Q8IUD6 432 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 GALNT4Q8N4A0 578 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 NT5C3BQ969T7 300 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 SBF1O95248 1867 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 GLDCP23378 1020 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 NAB1Q13506 487 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 TLR1Q15399 786 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 SEL1L3Q68CR1 1132 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 CEP97Q8IW35 865 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 FSTL5Q8N475 847 aaPredicted RBP19.86■□□□□ 0.77
COL13A1-205ENST00000398978 IPMKQ8NFU5 416 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 RNF34Q969K3 372 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 SMOQ99835 787 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 OR12D3Q9UGF7 316 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 DTNAQ9Y4J8 743 aa19.86■□□□□ 0.77
COL13A1-205ENST00000398978 GRID2O43424 1007 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 SNUPNO95149 360 aaKnown RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 VAPBO95292 243 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 AHSGP02765 367 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 RAB27AP51159 221 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 AP1ARQ63HQ0 302 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 KCTD11Q693B1 232 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 TWF2Q6IBS0 349 aaKnown RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 FASTKD5Q7L8L6 764 aaKnown RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 MFSD6LQ8IWD5 586 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 TMEM151AQ8N4L1 468 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 ZSCAN18Q8TBC5 510 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 NXNL1Q96CM4 212 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 ZNF419Q96HQ0 510 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 RTKNQ9BST9 563 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 SPATA16Q9BXB7 569 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 GDAP2Q9NXN4 497 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 XPR1Q9UBH6 696 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 NRCAMQ92823 1304 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 MATN2O00339 956 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 LRIG2O94898 1065 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 MT-CO1P00395 513 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 FAM200BP0CF97 657 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 HNRNPLP14866 589 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 BIRC2Q13490 618 aa19.85■□□□□ 0.77
COL13A1-205ENST00000398978 HNRNPDQ14103 355 aaKnown RBP19.85■□□□□ 0.77
COL13A1-205ENST00000398978 SNX17Q15036 470 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms