RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Cyth4Q80YW0 393 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Q8BL95 290 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Elmo1Q8BPU7 727 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lmcd1Q8VEE1 365 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Adam18Q9R157 719 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Mettl8A2AUU0 281 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm2888K7N746 267 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Pold2O35654 469 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 CaskO70589 926 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 AvilO88398 819 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Myl4P09541 193 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Nr2f1Q60632 422 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 PdxkQ8K183 312 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ints10Q8K2A7 710 aaKnown RBP16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gtf2e2Q9D902 292 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tspan4Q9DCK3 238 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Hsd17b11Q9EQ06 298 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 CroccQ8CJ40 2009 aa16.81■□□□□ 0.28
Ubr3-202ENSMUST00000112251 TpteG5E8H5 664 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ninj1O70131 152 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Rmdn3Q3UJU9 470 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Btbd10Q80X66 475 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Acad9Q8JZN5 625 aaKnown RBP16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tbc1d13Q8R3D1 400 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cyp2t4E9PWV0 503 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gtpbp1O08582 668 aaKnown RBP16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Hoxa2P31245 372 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Grid2ipQ0QWG9 1203 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Tmprss11eQ5S248 423 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Kxd1Q80XH1 177 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Slitrk6Q8C110 840 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 TiparpQ8C1B2 657 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cpsf1Q9EPU4 1441 aaKnown RBP16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cdc42ep4Q9JM96 349 aaKnown RBP16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lmo7E9PYF4 1699 aaKnown RBP16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Defa8P50706 81 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Morf4l1P60762 362 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 GsapQ3TCV3 858 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lpcat1Q3TFD2 534 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 ReltQ8BX43 436 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 IlkapQ8R0F6 392 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 S100zB9EJL3 99 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Alkbh1P0CB42 389 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Mill1Q8HWE7 395 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Calm4Q9JM83 148 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gli2Q0VGT2 1544 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Crispld1Q8CGD2 500 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Kat5Q8CHK4 513 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr615Q8VGY4 313 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Itga9B8JK39 1036 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trim40Q3UWA4 246 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Dennd5aQ6PAL8 1287 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Stk32cQ8QZV4 488 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Spg21Q9CQC8 308 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Btbd19S4R1I0 287 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lcn5A2AJB7 192 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Ankle1A8VU90 534 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 AdaP03958 352 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Capn13Q3UW68 665 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Oog3Q3UWY1 500 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Adgre4Q91ZE5 689 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 ApmapQ9D7N9 415 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Med11Q9D8C6 117 aa16.8■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Scgb2b21A0A087WQA9 112 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Mfsd13bA0A1L1SUA2 455 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zc3h7aE9PWW6 970 aaKnown RBP16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 2610021A01RikE9Q0Q3 834 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Sult3a2G5E904 293 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Kpna4O35343 521 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trpv1Q704Y3 839 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr271-ps1A0A1L1SQH2 283 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zfp809G3X9G7 402 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Bbip1J3QMK2 67 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Traf6P70196 530 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Fads2p1Q0VAX3 487 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Spdye4aQ5IBH6 268 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Pcdha9Q91Y11 979 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 SgshQ9EQ08 502 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Arl16B1ATY8 173 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Vmn2r50E9PW61 861 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Cyp2j8G3UZ38 503 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Vmn2r39L7N2E5 861 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 PrkcdP28867 674 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 FshrP35378 692 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 CrtamQ149L7 389 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Arl5aQ80ZU0 179 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Mapkap1Q8BKH7 522 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Plekha1Q8BUL6 383 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Pqbp1Q91VJ5 263 aaKnown RBP16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Dcun1d5Q9CXV9 237 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Trip11E9Q512 1976 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Flt1P35969 1333 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Slc16a2O70324 545 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 OcmP51879 109 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gsdmc3Q8CB12 480 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 EcdQ9CS74 641 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Olfr1040A2ARY1 313 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Lrrc38A2VDH3 298 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Zfp358E9Q8M1 571 aa16.79■□□□□ 0.28
Ubr3-202ENSMUST00000112251 Gm5849J3QPE5 117 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms