RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 TtpalQ9D3D0 343 aa10.46□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Grik3B1AS29 919 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Banf1O54962 89 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Aqp1Q02013 269 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sox8Q04886 464 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pld5Q3UNN8 536 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ctc1Q5SUQ9 1212 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 OgdhQ60597 1023 aaKnown RBP10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Acvrl1Q61288 502 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bcap29Q61334 240 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mbtd1Q6P5G3 631 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc39a13Q8BZH0 361 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Trim33Q99PP7 1142 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ogfod2Q9CQ04 349 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Q9CR55 154 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nwd2Q6P5U7 1742 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vmn2r4K7N784 913 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 OmdO35103 423 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 IgfalsP70389 603 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 MylpfP97457 169 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pik3r6Q3U6Q4 756 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Znf583Q3V080 568 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nr6a1Q64249 495 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Actr8Q8R2S9 624 aaKnown RBP10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Uroc1Q8VC12 676 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Stx18Q8VDS8 334 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Setd7Q8VHL1 366 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Jag1Q9QXX0 1218 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cyb561d2Q9WUE3 222 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vmn2r19G5E8G4 854 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ctnnd2O35927 1247 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 InvsO89019 1062 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hspa1bP17879 642 aaKnown RBP10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PdgfaP20033 211 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Psen1P49769 467 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tfap2bQ61313 459 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Arnt2Q61324 712 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Glt8d2Q640P4 349 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Xpnpep1Q6P1B1 623 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ssx9Q6XAS3 170 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 ClyblQ8R4N0 338 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fbxo33Q8VE08 562 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 VillQ91YD6 859 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ppp1r16aQ923M0 524 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lrrc17Q9CXD9 443 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Snx7Q9CY18 387 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 CabyrQ9D424 453 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ifi30Q9ESY9 248 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slfn8B1ARD8 910 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mc4rP56450 332 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sephs2P97364 452 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 MregQ6NVG5 214 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dsg1bQ7TSF1 1060 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Arhgef33Q8BW86 850 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Map1sQ8C052 973 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfr1352Q8VGX5 309 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Unc45aQ99KD5 944 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Prpf19Q99KP6 504 aaKnown RBP10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ptf1aQ9QX98 324 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Prmt2Q9R144 448 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Map3k14Q9WUL6 942 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Klrc1Q9Z202 244 aa10.45□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 2010300C02RikE9Q3M9 1175 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Srsf11E9Q6E5 511 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tmigd3G3X8R9 209 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tnk2O54967 1055 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ctbp1O88712 441 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PcnaP17918 261 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mmp3P28862 477 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adcy6Q01341 1165 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 MyrflQ3UN70 904 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ugt3a1Q3UP75 523 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lcp2Q60787 533 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Deup1Q7M6Y5 601 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Creb3l2Q8BH52 521 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Thoc5Q8BKT7 683 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sfr1Q8BP27 319 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cnpy4Q8BQ47 245 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Trmt13Q8BYH3 481 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ssh3Q8K330 649 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gtf2h3Q8VD76 309 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ing3Q8VEK6 421 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mapk8Q91Y86 384 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 LiasQ99M04 373 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ssxb1Q9CPU1 170 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sh2d4aQ9D7V1 421 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 AcadsbQ9DBL1 432 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 EmcnQ9R0H2 261 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dyrk1bQ9Z188 629 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Top3bQ9Z321 862 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Iqca1lA6H690 825 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 UprtB1AVZ0 310 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zc3h7aE9PWW6 970 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PargO88622 969 aaKnown RBP10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PrlP06879 226 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 HmbsP22907 361 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Oprl1P35377 367 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Kcnj6P48542 425 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Scrn3Q3TMH2 418 aa10.44□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Akap14Q3V0I7 536 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms