RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CELF1Q92879 486 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 SKA1Q96BD8 255 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 SDCCAG3Q96C92 435 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ZDHHC12Q96GR4 267 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 RBM17Q96I25 401 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 LRIG1Q96JA1 1093 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF668Q96K58 619 aaPredicted RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MARK4Q96L34 752 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 EIF2AK1Q9BQI3 630 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 UTP14AQ9BVJ6 771 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TRIM5Q9C035 493 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TTYH3Q9C0H2 523 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PRSS22Q9GZN4 317 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PRDM8Q9NQV8 689 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 HELLSQ9NRZ9 838 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 INTS13Q9NVM9 706 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 MAP3K20Q9NYL2 800 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TMOD4Q9NZQ9 345 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CTTNBP2NLQ9P2B4 639 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 ABT1Q9ULW3 272 aaKnown RBP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CDYLQ9Y232 598 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 NUDCQ9Y266 331 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 CRYL1Q9Y2S2 319 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 PTPRFP10586 1907 aa2.8□□□□□ -1.96
SMARCB1-208ENST00000634926 TRIOBPQ9H2D6 2365 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 KIAA0100Q14667 2235 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 B9A039 149 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 FCHO1O14526 889 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ZNF213O14771 459 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PCDH17O14917 1159 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ORC4O43929 436 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ECE2O60344 883 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PIAS2O75928 621 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 BBOX1O75936 387 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 USP1O94782 785 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ACTL6BO94805 426 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 CKMT1AP12532 417 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PPP3CBP16298 524 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 KCNA2P16389 499 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 CERS1P27544 350 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PPIFP30405 207 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ADD2P35612 726 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TMPOP42166 694 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ARHGAP25P42331 645 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 CASP2P42575 452 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ALDH18A1P54886 795 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 HUNKP57058 714 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 LILRA4P59901 499 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 AP2B1P63010 937 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 KRT17Q04695 432 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 HYAL1Q12794 435 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 MYO1EQ12965 1108 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ATP1A4Q13733 1029 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 KCNAB1Q14722 419 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TNIP1Q15025 636 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 FAM110CQ1W6H9 321 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ADCK5Q3MIX3 580 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 Q4G0T1 1027 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 HSP90AB3PQ58FF7 597 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 MANEALQ5VSG8 457 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 WDR78Q5VTH9 848 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SUMO4Q6EEV6 95 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SFRP4Q6FHJ7 346 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RETSATQ6NUM9 610 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 LAYNQ6UX15 382 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC30A10Q6XR72 485 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 COPS6Q7L5N1 327 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 KCTD20Q7Z5Y7 419 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 LRRTM4Q86VH4 590 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RASGRP3Q8IV61 690 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC44A2Q8IWA5 706 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 FTSJ3Q8IY81 847 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 NRSN1Q8IZ57 195 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 NSUN7Q8NE18 718 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 OR1N1Q8NGS0 311 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SCAMP5Q8TAC9 235 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TBC1D16Q8TBP0 767 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 BPIFB1Q8TDL5 484 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ASB12Q8WXK4 309 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 THAP4Q8WY91 577 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 HERVK_113Q902F9 699 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RUBCNQ92622 972 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RFKQ969G6 155 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PPP2R3CQ969Q6 453 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ZBED3Q96IU2 234 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PGBD1Q96JS3 809 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PYM1Q9BRP8 204 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 RTKNQ9BST9 563 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PTDSS2Q9BVG9 487 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ZCWPW1Q9H0M4 648 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 SLC25A32Q9H2D1 315 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 PABPC3Q9H361 631 aaKnown RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 UNC45AQ9H3U1 944 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 ZHX3Q9H4I2 956 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 MLXIPQ9HAP2 919 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 WASH6PQ9NQA3 447 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 TUBA8Q9NY65 449 aaPredicted RBP2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 GGA3Q9NZ52 723 aa2.79□□□□□ -1.96
SMARCB1-208ENST00000634926 LPAR3Q9UBY5 353 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms