RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 KDM4CQ9H3R0 1056 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 ASNSD1Q9NWL6 643 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 ARHGAP20Q9P2F6 1191 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 APEX2Q9UBZ4 518 aa17.27■□□□□ 0.36
LINC01842-201ENST00000588275 SMG1Q96Q15 3661 aaKnown RBP17.27■□□□□ 0.35
LINC01842-201ENST00000588275 C10orf142B7Z368 130 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 M0QYT0 321 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 ATP9BO43861 1147 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 MAGEC1O60732 1142 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 PAGE1O75459 146 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 DAB1O75553 588 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 ERBB2P04626 1255 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 C1SP09871 688 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 CDK4P11802 303 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 TARDBPQ13148 414 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC01842-201ENST00000588275 SETMARQ53H47 684 aaPredicted RBP17.26■□□□□ 0.35
LINC01842-201ENST00000588275 C14orf80Q86SX3 495 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 KLK6Q92876 244 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 ALG14Q96F25 216 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 BBC3Q96PG8 261 aaPredicted RBP17.26■□□□□ 0.35
LINC01842-201ENST00000588275 ERVMER34-1Q9H9K5 563 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 DMTF1Q9Y222 760 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 KNTC1P50748 2209 aa17.26■□□□□ 0.35
LINC01842-201ENST00000588275 MYLKQ15746 1914 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 A0A087WV48 116 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 FAM170AA1A519 330 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 KPNA3O00505 521 aaPredicted RBP17.25■□□□□ 0.35
LINC01842-201ENST00000588275 MCF2LO15068 1137 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 CLDN11O75508 207 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 RHOCP08134 193 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 RXRGP48443 463 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 PTK2Q05397 1052 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 EXOC3L4Q17RC7 722 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 SFMBT2Q5VUG0 894 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 OLFML1Q6UWY5 402 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 TRIM69Q86WT6 500 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 SH2D3CQ8N5H7 860 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 ATP11CQ8NB49 1132 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 FAM131CQ96AQ9 280 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 PLCB1Q9NQ66 1216 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 PPM1HQ9ULR3 514 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 PCDHGC3Q9UN70 934 aa17.25■□□□□ 0.35
LINC01842-201ENST00000588275 PRAMEF26H0Y7S4 382 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 ALOX15BO15296 676 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SLC31A1O15431 190 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SNAP91O60641 907 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 RNGTTO60942 597 aaKnown RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 CNTN5O94779 1100 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 PNMA6AP0CW24 399 aaPredicted RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SRCP12931 536 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 PRLRP16471 622 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 CKMT2P17540 419 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 KRT9P35527 623 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 NUDT1P36639 197 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 MTIF2P46199 727 aaKnown RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SULT1E1P49888 294 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 CDH4P55283 916 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SNX16P57768 344 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 KRT83P78385 493 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SLC6A3Q01959 620 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 PTPN20Q4JDL3 420 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 FBXL19Q6PCT2 694 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 IQCHQ86VS3 1027 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SHC3Q92529 594 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 TSC1Q92574 1164 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 KLHDC7BQ96G42 594 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 CCDC114Q96M63 670 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 PDCL3Q9H2J4 239 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 PREBQ9HCU5 417 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 DYRK4Q9NR20 520 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 RWDD2AQ9UIY3 292 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 AJAP1Q9UKB5 411 aaPredicted RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
LINC01842-201ENST00000588275 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
LINC01842-201ENST00000588275 MT-CO1P00395 513 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 CTSLP07711 333 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 RRM1P23921 792 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 ITPKBP27987 946 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 NOS2P35228 1153 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
LINC01842-201ENST00000588275 DAB2P98082 770 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 OVGP1Q12889 678 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 MTA1Q13330 715 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 CAMK4Q16566 473 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 ALFQ53S48 1182 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 HS1BP3Q53T59 392 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 PIP5KL1Q5T9C9 394 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 LRRC69Q6ZNQ3 347 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 KANSL1Q7Z3B3 1105 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 SLC47A2Q86VL8 602 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 GRIN3AQ8TCU5 1115 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 C2orf49Q9BVC5 232 aaPredicted RBP17.23■□□□□ 0.35
LINC01842-201ENST00000588275 TKTL2Q9H0I9 626 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 WDCPQ9H6R7 721 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 PIGVQ9NUD9 493 aa17.23■□□□□ 0.35
LINC01842-201ENST00000588275 OR51B4Q9Y5P0 310 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms