RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 FZD10Q9ULW2 581 aa12.99□□□□□ -0.33
TVP23B-204ENST00000571018 NEU3Q9UQ49 428 aa12.99□□□□□ -0.33
TVP23B-204ENST00000571018 HS3ST2Q9Y278 367 aa12.99□□□□□ -0.33
TVP23B-204ENST00000571018 SCINQ9Y6U3 715 aa12.99□□□□□ -0.33
TVP23B-204ENST00000571018 THADAQ6YHU6 1953 aa12.99□□□□□ -0.33
TVP23B-204ENST00000571018 GVINP1Q7Z2Y8 2422 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 PATE3B3GLJ2 98 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 KHNYNO15037 678 aaKnown RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 GDF9O60383 454 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 SNAP91O60641 907 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 SRCP12931 536 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 VAV1P15498 845 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 ITPKAP23677 461 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 PSMA2P25787 234 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 MAPKAPK2P49137 400 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 GNA12Q03113 381 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 ELAVL3Q14576 367 aaKnown RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 DLG2Q15700 870 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 CST6Q15828 149 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 RSPO4Q2I0M5 234 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 TTC31Q49AM3 519 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 ACCSLQ4AC99 568 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 AASDHQ4L235 1098 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 TCEAL6Q6IPX3 200 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 RWDD4Q6NW29 188 aaKnown RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 USP30Q70CQ3 517 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 MMAAQ8IVH4 418 aaKnown RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 PYROXD2Q8N2H3 581 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 ARFGAP1Q8N6T3 406 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 OR7D4Q8NG98 312 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 OR8K1Q8NGG5 319 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 TCEAL3Q969E4 200 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 DNAJC7Q99615 494 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 TRIM7Q9C029 511 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 PABPC3Q9H361 631 aaKnown RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 RXFP3Q9NSD7 469 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 MYO1AQ9UBC5 1043 aa12.98□□□□□ -0.33
TVP23B-204ENST00000571018 EVLQ9UI08 416 aaPredicted RBP12.98□□□□□ -0.33
TVP23B-204ENST00000571018 METTL12A8MUP2 240 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ZMPSTE24O75844 475 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 RNF8O76064 485 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 MT-CO1P00395 513 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 HOXB1P14653 301 aaPredicted RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SLC8A1P32418 973 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ACSL1P33121 698 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ETFBP38117 255 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 LIMK1P53667 647 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 IRX4P78413 519 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SLC20A2Q08357 652 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SEMA3BQ13214 749 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 PUM1Q14671 1186 aaKnown RBP eCLIP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SYCP2LQ5T4T6 812 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 RETSATQ6NUM9 610 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SARM1Q6SZW1 724 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 FAM124AQ86V42 546 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ATP11CQ8NB49 1132 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 DNASE2BQ8WZ79 361 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 NCAPGQ9BPX3 1015 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SPON2Q9BUD6 331 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 BTBD1Q9H0C5 482 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ATP13A1Q9HD20 1204 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 NDFIP2Q9NV92 336 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 CDV3Q9UKY7 258 aaKnown RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 NENFQ9UMX5 172 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 NCKAP1Q9Y2A7 1128 aa12.97□□□□□ -0.33
TVP23B-204ENST00000571018 TNRC6BQ9UPQ9 1833 aaKnown RBP12.97□□□□□ -0.33
TVP23B-204ENST00000571018 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
TVP23B-204ENST00000571018 CXorf51AA0A1B0GTR3 108 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 LNP1A1A4G5 178 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
TVP23B-204ENST00000571018 K7ERQ8 282 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 CBX4O00257 560 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 SLC30A4O14863 429 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 MCF2LO15068 1137 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 MID1O15344 667 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 C5AR1P21730 350 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 GLDCP23378 1020 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 EPHB2P29323 1055 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 EIF4A3P38919 411 aaKnown RBP12.96□□□□□ -0.33
TVP23B-204ENST00000571018 ACAP1Q15027 740 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 DUOXA1Q1HG43 343 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 WDR45BQ5MNZ6 344 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 CCDC122Q5T0U0 273 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 LINGO4Q6UY18 593 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 Q6ZVU0 165 aa12.96□□□□□ -0.33
TVP23B-204ENST00000571018 RABEPKQ7Z6M1 372 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms