RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 DNAH14Q0VDD8 3507 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 K7ERQ8 282 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 KHNYNO15037 678 aaKnown RBP28.98■■■□□ 2.23
NME3-203ENST00000563367 MID1O15344 667 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 RNASEH1O60930 286 aaKnown RBP28.98■■■□□ 2.23
NME3-203ENST00000563367 MYBL1P10243 752 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 SRCP12931 536 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 HNRNPH3P31942 346 aaKnown RBP28.98■■■□□ 2.23
NME3-203ENST00000563367 L1CAMP32004 1257 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 IRX4P78413 519 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 GNA12Q03113 381 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 LINGO4Q6UY18 593 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 VPS36Q86VN1 386 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 VSTM4Q8IW00 320 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 NETO1Q8TDF5 533 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 FOXJ1Q92949 421 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 SPON2Q9BUD6 331 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 TMEM248Q9NWD8 314 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 SERGEFQ9UGK8 458 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 DNAI1Q9UI46 699 aa28.98■■■□□ 2.23
NME3-203ENST00000563367 LNP1A1A4G5 178 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 ZMPSTE24O75844 475 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 MAOBP27338 520 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 PSMD8P48556 350 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 AIF1P55008 147 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 ELAVL3Q14576 367 aaKnown RBP28.97■■■□□ 2.23
NME3-203ENST00000563367 TTC31Q49AM3 519 aaPredicted RBP28.97■■■□□ 2.23
NME3-203ENST00000563367 CADM4Q8NFZ8 388 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 FNIP1Q8TF40 1166 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 GPATCH2LQ9NWQ4 482 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 SCINQ9Y6U3 715 aa28.97■■■□□ 2.23
NME3-203ENST00000563367 SMAD6O43541 496 aaKnown RBP28.96■■■□□ 2.23
NME3-203ENST00000563367 DESP17661 470 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 SLC8A1P32418 973 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 ACVRL1P37023 503 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 MAPKAPK2P49137 400 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 SEMA3BQ13214 749 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 PUM1Q14671 1186 aaKnown RBP eCLIP28.96■■■□□ 2.23
NME3-203ENST00000563367 TRIM61Q5EBN2 209 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 Q6ZVU0 165 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 ATP11CQ8NB49 1132 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 PEBP4Q96S96 227 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 THAP2Q9H0W7 228 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 C6orf106Q9H6K1 298 aaPredicted RBP28.96■■■□□ 2.23
NME3-203ENST00000563367 RETREG1Q9H6L5 497 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 ATP13A1Q9HD20 1204 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 FBXL12Q9NXK8 326 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 EVLQ9UI08 416 aaPredicted RBP28.96■■■□□ 2.23
NME3-203ENST00000563367 SCML1Q9UN30 329 aa28.96■■■□□ 2.23
NME3-203ENST00000563367 PCDH15Q96QU1 1955 aa28.95■■■□□ 2.23
NME3-203ENST00000563367 A0A1W2PP55 124 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 METTL12A8MUP2 240 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 CBX4O00257 560 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 HOXD12P35452 270 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 DPP6P42658 865 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 TRIM14Q14142 442 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 DCAF12L1Q5VU92 463 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 USP30Q70CQ3 517 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 RGL4Q8IZJ4 473 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 GANCQ8TET4 914 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 DNAJC7Q99615 494 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 ACE2Q9BYF1 805 aaPredicted RBP28.95■■■□□ 2.22
NME3-203ENST00000563367 BTBD1Q9H0C5 482 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 MRPL47Q9HD33 250 aaKnown RBP28.95■■■□□ 2.22
NME3-203ENST00000563367 PCSK1NQ9UHG2 260 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 NENFQ9UMX5 172 aa28.95■■■□□ 2.22
NME3-203ENST00000563367 CACNA1EQ15878 2313 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 MEI4A8MW99 385 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 SLC30A4O14863 429 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 CREB3O43889 395 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 SDHBP21912 280 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 EPHB2P29323 1055 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 EIF4A3P38919 411 aaKnown RBP28.94■■■□□ 2.22
NME3-203ENST00000563367 METAP1P53582 386 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 ARF5P84085 180 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 SYCP2LQ5T4T6 812 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 ALKBH5Q6P6C2 394 aaKnown RBP28.94■■■□□ 2.22
NME3-203ENST00000563367 SLC23A3Q6PIS1 610 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 AADATQ8N5Z0 425 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 OR8K1Q8NGG5 319 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 DNASE2BQ8WZ79 361 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 ARHGEF2Q92974 986 aaKnown RBP28.94■■■□□ 2.22
NME3-203ENST00000563367 EDEM2Q9BV94 578 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 NEUROG2Q9H2A3 272 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 ACTL7AQ9Y615 435 aa28.94■■■□□ 2.22
NME3-203ENST00000563367 BNIP3LO60238 219 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 SEMA4FO95754 770 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 IL1BP01584 269 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 MIPP30301 263 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 LIMK1P53667 647 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 CA9Q16790 459 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 DUOXA1Q1HG43 343 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 WDR45BQ5MNZ6 344 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 CCDC122Q5T0U0 273 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 STPG1Q5TH74 334 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 DAB2IPQ5VWQ8 1189 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 IL31Q6EBC2 164 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 CYP4V2Q6ZWL3 525 aaPredicted RBP28.93■■■□□ 2.22
NME3-203ENST00000563367 OR8D1Q8WZ84 308 aa28.93■■■□□ 2.22
NME3-203ENST00000563367 NOL6Q9H6R4 1146 aaKnown RBP28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms