RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 PPM1HQ9ULR3 514 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 DMTF1Q9Y222 760 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 TBC1D30Q9Y2I9 924 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 RAXQ9Y2V3 346 aa19.34■□□□□ 0.69
CDKN3-209ENST00000556102 FAM149AA5PLN7 773 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 FOXN3O00409 490 aaPredicted RBP19.33■□□□□ 0.68
CDKN3-209ENST00000556102 MCF2LO15068 1137 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 LDOC1O95751 146 aaPredicted RBP19.33■□□□□ 0.68
CDKN3-209ENST00000556102 RXRGP48443 463 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 CNTN1Q12860 1018 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 MAN2A1Q16706 1144 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 TPD52L1Q16890 204 aaPredicted RBP19.33■□□□□ 0.68
CDKN3-209ENST00000556102 AGBL4Q5VU57 503 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 OTUD1Q5VV17 481 aaPredicted RBP19.33■□□□□ 0.68
CDKN3-209ENST00000556102 Q6ZVU0 165 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 C14orf80Q86SX3 495 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 IQCHQ86VS3 1027 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 TMPRSS12Q86WS5 348 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 TRIM69Q86WT6 500 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 PDCD7Q8N8D1 485 aaKnown RBP19.33■□□□□ 0.68
CDKN3-209ENST00000556102 MLKLQ8NB16 471 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 PIP4K2CQ8TBX8 421 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 NPY6RQ99463 290 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 SIK2Q9H0K1 926 aa19.33■□□□□ 0.68
CDKN3-209ENST00000556102 CELSR3Q9NYQ7 3312 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 BAHCC1Q9P281 2608 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 E9PAM4 449 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 CBX4O00257 560 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 MAGEC1O60732 1142 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 C1SP09871 688 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 PNMA6AP0CW24 399 aaPredicted RBP19.32■□□□□ 0.68
CDKN3-209ENST00000556102 CDK4P11802 303 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 ZNF18P17022 549 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 MAT2AP31153 395 aaKnown RBP19.32■□□□□ 0.68
CDKN3-209ENST00000556102 CXCR3P49682 368 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 BPIFB4P59827 614 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 CYP4F3Q08477 520 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 OVGP1Q12889 678 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 COL28A1Q2UY09 1125 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 BRMS1LQ5PSV4 323 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 FAM71AQ8IYT1 594 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 EID2Q8N6I1 236 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 MUC3BQ9H195 1237 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 WDCPQ9H6R7 721 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 PLCB1Q9NQ66 1216 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 PIGVQ9NUD9 493 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 ARHGEF38Q9NXL2 777 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 STAP1Q9ULZ2 295 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 HS3ST2Q9Y278 367 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 DOCK4Q8N1I0 1966 aa19.32■□□□□ 0.68
CDKN3-209ENST00000556102 BNIP3LO60238 219 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 RFPL3O75679 317 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 CNTN5O94779 1100 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 ADCY5O95622 1261 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 RHOCP08134 193 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 SRCP12931 536 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 KRT83P78385 493 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 DNAJC3Q13217 504 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 POM121L1PQ3SYA9 428 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 SETMARQ53H47 684 aaPredicted RBP19.31■□□□□ 0.68
CDKN3-209ENST00000556102 SPATS2Q86XZ4 545 aaKnown RBP19.31■□□□□ 0.68
CDKN3-209ENST00000556102 FAM114A1Q8IWE2 563 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 TMEM35BQ8NCS4 154 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 PGAP3Q96FM1 320 aaPredicted RBP19.31■□□□□ 0.68
CDKN3-209ENST00000556102 TKTL2Q9H0I9 626 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 SCUBE2Q9NQ36 999 aa19.31■□□□□ 0.68
CDKN3-209ENST00000556102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.31■□□□□ 0.68
CDKN3-209ENST00000556102 CDH5P33151 784 aaPredicted RBP19.3■□□□□ 0.68
CDKN3-209ENST00000556102 SCNN1AP37088 669 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 ACADVLP49748 655 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 SULT1E1P49888 294 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 RNASE9P60153 205 aaKnown RBP19.3■□□□□ 0.68
CDKN3-209ENST00000556102 BNIP3Q12983 259 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 COL9A2Q14055 689 aaPredicted RBP19.3■□□□□ 0.68
CDKN3-209ENST00000556102 STAT4Q14765 748 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 ALFQ53S48 1182 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 SFMBT2Q5VUG0 894 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 PDZD3Q86UT5 571 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 ZNF683Q8IZ20 524 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 TSC1Q92574 1164 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 NT5C3BQ969T7 300 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 CCDC114Q96M63 670 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 PSMB7Q99436 277 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 C2orf49Q9BVC5 232 aaPredicted RBP19.3■□□□□ 0.68
CDKN3-209ENST00000556102 PDCL3Q9H2J4 239 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 NDST4Q9H3R1 872 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 PREBQ9HCU5 417 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 ANLNQ9NQW6 1124 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 TMEM51Q9NW97 253 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 FARP1Q9Y4F1 1045 aaPredicted RBP19.3■□□□□ 0.68
CDKN3-209ENST00000556102 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
CDKN3-209ENST00000556102 MYLKQ15746 1914 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 PRAMEF26H0Y7S4 382 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 I6L893 689 aaPredicted RBP19.29■□□□□ 0.68
CDKN3-209ENST00000556102 SNAP91O60641 907 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 MT-CO1P00395 513 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 F9P00740 461 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 TFE3P19532 575 aaPredicted RBP19.29■□□□□ 0.68
CDKN3-209ENST00000556102 HNF1BP35680 557 aa19.29■□□□□ 0.68
CDKN3-209ENST00000556102 GABRB2P47870 512 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms