RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 NLRP14Q86W24 1093 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 MMAAQ8IVH4 418 aaKnown RBP15.75■□□□□ 0.11
CPSF1-210ENST00000532935 DRC7Q8IY82 874 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 PYROXD2Q8N2H3 581 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 STK40Q8N2I9 435 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 SH2D3CQ8N5H7 860 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 CADM4Q8NFZ8 388 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 OR7D4Q8NG98 312 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 FAM129BQ96TA1 746 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 PABPC3Q9H361 631 aaKnown RBP15.75■□□□□ 0.11
CPSF1-210ENST00000532935 MYO1AQ9UBC5 1043 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 EVLQ9UI08 416 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-210ENST00000532935 FZD10Q9ULW2 581 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 HS3ST2Q9Y278 367 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 PCDH15Q96QU1 1955 aa15.75■□□□□ 0.11
CPSF1-210ENST00000532935 LNP1A1A4G5 178 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 MID1O15344 667 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 MT-CO1P00395 513 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 SRCP12931 536 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 GLDCP23378 1020 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 HNRNPH3P31942 346 aaKnown RBP15.74■□□□□ 0.11
CPSF1-210ENST00000532935 ACSL1P33121 698 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 MAPKAPK2P49137 400 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 GNA12Q03113 381 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 TRIM14Q14142 442 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 TRIM61Q5EBN2 209 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 SYCP2LQ5T4T6 812 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 VSTM4Q8IW00 320 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 RGL4Q8IZJ4 473 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 FNIP1Q8TF40 1166 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 SPON2Q9BUD6 331 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 TRIM7Q9C029 511 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 ATP13A1Q9HD20 1204 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 MRPL47Q9HD33 250 aaKnown RBP15.74■□□□□ 0.11
CPSF1-210ENST00000532935 NDFIP2Q9NV92 336 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 TMEM248Q9NWD8 314 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 ARHGAP20Q9P2F6 1191 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 NCKAP1Q9Y2A7 1128 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 CACNA1AO00555 2505 aa15.74■□□□□ 0.11
CPSF1-210ENST00000532935 TP53BP1Q12888 1972 aaPredicted RBP15.73■□□□□ 0.11
CPSF1-210ENST00000532935 A0A087X0T9 212 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 MEI4A8MW99 385 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 SLC30A4O14863 429 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 FAM228BP0C875 321 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 SLC8A1P32418 973 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 PSMD8P48556 350 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 LIMK1P53667 647 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 IRX4P78413 519 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 SFSWAPQ12872 951 aaKnown RBP15.73■□□□□ 0.11
CPSF1-210ENST00000532935 DUOXA1Q1HG43 343 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 WDR45BQ5MNZ6 344 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 DCAF12L1Q5VU92 463 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 SLC23A3Q6PIS1 610 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 LINGO4Q6UY18 593 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 Q6ZVU0 165 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 USP30Q70CQ3 517 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 ARFGAP1Q8N6T3 406 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 ATP11CQ8NB49 1132 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 CEP76Q8TAP6 659 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 GANCQ8TET4 914 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 EPAS1Q99814 870 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 EDEM2Q9BV94 578 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 NUSAP1Q9BXS6 441 aaKnown RBP15.73■□□□□ 0.11
CPSF1-210ENST00000532935 BTBD1Q9H0C5 482 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 PCED1AQ9H1Q7 454 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 SGK2Q9HBY8 427 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 FBXL12Q9NXK8 326 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 PLXNA2O75051 1894 aa15.73■□□□□ 0.11
CPSF1-210ENST00000532935 A0A1W2PP55 124 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 METTL12A8MUP2 240 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 K7ERQ8 282 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 CBX4O00257 560 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 SMAD6O43541 496 aaKnown RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 CREB3O43889 395 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ZMPSTE24O75844 475 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 RNF8O76064 485 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 SEMA4FO95754 770 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ADH1BP00325 375 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 IL1BP01584 269 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 CFIP05156 583 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 C5AR1P21730 350 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 MAOBP27338 520 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 EPHB2P29323 1055 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ETFBP38117 255 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 CLCN6P51797 869 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 SEMA3BQ13214 749 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 STPG1Q5TH74 334 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 IL31Q6EBC2 164 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 RETSATQ6NUM9 610 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ALKBH5Q6P6C2 394 aaKnown RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 RABEPKQ7Z6M1 372 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 DSG4Q86SJ6 1040 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 RTL3Q8N8U3 475 aaKnown RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 DNASE2BQ8WZ79 361 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 OR8D1Q8WZ84 308 aa15.72■□□□□ 0.11
CPSF1-210ENST00000532935 ARHGEF2Q92974 986 aaKnown RBP15.72■□□□□ 0.11
CPSF1-210ENST00000532935 DNAJC7Q99615 494 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms