RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 WNT6Q9Y6F9 365 aa5.56□□□□□ -1.52
LSM5-206ENST00000409987 SETD1BQ9UPS6 1966 aaKnown RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 UBE2Q2LH0YL09 131 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 SYN3O14994 580 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 P4HA2O15460 535 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 DOK2O60496 412 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 TULP3O75386 442 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 C1QL1O75973 258 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 CHRM5P08912 532 aaPredicted RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 HOXB9P17482 250 aaPredicted RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 CHMP24386 653 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 HNF1BP35680 557 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ACVRL1P37023 503 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 SOX2P48431 317 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 PTH2RP49190 550 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 CLK3P49761 638 aaKnown RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 GOLGA8FQ08AF8 430 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 BYSLQ13895 437 aaKnown RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 ERV3-1Q14264 604 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ANXA2RQ3ZCQ2 193 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 NAA35Q5VZE5 725 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 H1FNTQ75WM6 255 aaPredicted RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 GALNT7Q86SF2 657 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ARHGEF25Q86VW2 580 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ZSCAN30Q86W11 494 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ZNF764Q96H86 408 aaPredicted RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 TTYH1Q9H313 450 aaPredicted RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 GHITMQ9H3K2 345 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 ZCCHC17Q9NP64 241 aaKnown RBP5.55□□□□□ -1.52
LSM5-206ENST00000409987 PLSCR4Q9NRQ2 329 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 KRT84Q9NSB2 600 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 SEMA4GQ9NTN9 838 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 TMEM248Q9NWD8 314 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 CNPY2Q9Y2B0 182 aa5.55□□□□□ -1.52
LSM5-206ENST00000409987 EMSYQ7Z589 1322 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 PABPN1LA6NDY0 278 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 SPTLC2O15270 562 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 DKC1O60832 514 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-206ENST00000409987 GUCY1B2O75343 617 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 F9P00740 461 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 DNTTP04053 509 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 CYP2A6P11509 494 aaPredicted RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 POLD2P49005 469 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 ARF3P61204 181 aaPredicted RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 KRT83P78385 493 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 ARF1P84077 181 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 ZXDAP98168 799 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 COL10A1Q03692 680 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 ZBTB16Q05516 673 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 FHL2Q14192 279 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 TSTQ16762 297 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 PROSER3Q2NL68 480 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 PRICKLE4Q2TBC4 344 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 AP5B1Q2VPB7 878 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 CCDC92Q53HC0 331 aaPredicted RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 PRAMEF17Q5VTA0 474 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 NAPEPLDQ6IQ20 393 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 SLC22A25Q6T423 547 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 ADGRG6Q86SQ4 1221 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 PNLDC1Q8NA58 520 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 OR52N4Q8NGI2 321 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 RFWD2Q8NHY2 731 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 ADAD1Q96M93 576 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 FCRL5Q96RD9 977 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-206ENST00000409987 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 INTS2Q9H0H0 1204 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 ARL15Q9NXU5 204 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 TBC1D29Q9UFV1 150 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 GIMAP2Q9UG22 337 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 VPS28Q9UK41 221 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 DTX4Q9Y2E6 619 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 CCDC180Q9P1Z9 1646 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 RB1CC1Q8TDY2 1594 aa5.54□□□□□ -1.52
LSM5-206ENST00000409987 TDRD9Q8NDG6 1382 aaKnown RBP5.54□□□□□ -1.52
LSM5-206ENST00000409987 AOX1Q06278 1338 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 TMEM232C9JQI7 657 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 TNPO2O14787 897 aaKnown RBP5.53□□□□□ -1.52
LSM5-206ENST00000409987 SGPL1O95470 568 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 TGFB3P10600 412 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 ST6GAL1P15907 406 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 GSTM2P28161 218 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 TYK2P29597 1187 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 UBA7P41226 1012 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 MTNR1AP48039 350 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 INHBCP55103 352 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 DPTQ07507 201 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 CUL4AQ13619 759 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 CAMK1Q14012 370 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 NAA25Q14CX7 972 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 PLCB4Q15147 1175 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 CERKLQ49MI3 558 aaPredicted RBP5.53□□□□□ -1.52
LSM5-206ENST00000409987 ARL13AQ5H913 290 aaPredicted RBP5.53□□□□□ -1.52
LSM5-206ENST00000409987 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 B4GALNT4Q76KP1 1039 aa5.53□□□□□ -1.52
LSM5-206ENST00000409987 CHD1LQ86WJ1 897 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms