RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 SMU1Q2TAY7 513 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 KLHL35Q6PF15 583 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 ARHGAP36Q6ZRI8 547 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 URGCPQ8TCY9 931 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 LRTOMTQ8WZ04 291 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 TEKT5Q96M29 485 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 OSBPL10Q9BXB5 764 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 POMKQ9H5K3 350 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 AFF4Q9UHB7 1163 aaKnown RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 EGFL7Q9UHF1 273 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 FBXO9Q9UK97 447 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 COG5Q9UP83 839 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 hCG_1818297A0A087WSY0 165 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 USP12O75317 370 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 PDGFRBP09619 1106 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 CCNA1P78396 465 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 RALGDSQ12967 914 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 TSNQ15631 228 aaKnown RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 CNTD1Q8N815 330 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 CENPIQ92674 756 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
SREBF1-203ENST00000395751 ZNF341Q9BYN7 854 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 KCNH7Q9NS40 1196 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 PRR12Q9ULL5 1215 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 AP4E1Q9UPM8 1137 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 NEO1Q92859 1461 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 CAMSAP1Q5T5Y3 1602 aa17.28■□□□□ 0.36
SREBF1-203ENST00000395751 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 EFCAB14O75071 495 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 MOCS2O96007 188 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ERVK-10P10266 1014 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 NR4A1P22736 598 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 MIPP30301 263 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 RAP1GAPP47736 663 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ASRGL1Q7L266 308 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 FBXO30Q8TB52 745 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ASB2Q96Q27 587 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 MID1IP1Q9NPA3 183 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 C12orf4Q9NQ89 552 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 PIH1D1Q9NWS0 290 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 PCDHGA10Q9Y5H3 936 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 PCDHA11Q9Y5I1 949 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 VEGFAP15692 232 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 EIF4BP23588 611 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ADSLP30566 484 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 RRM2P31350 389 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 GEMP55040 296 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 EMC2Q15006 297 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 HERC3Q15034 1050 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 NFIL3Q16649 462 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 TRIM71Q2Q1W2 868 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ZNF284Q2VY69 593 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 INO80DQ53TQ3 878 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 RC3H1Q5TC82 1133 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 IKBIPQ70UQ0 350 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 APPL2Q8NEU8 664 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 ZNF668Q96K58 619 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 TRIM62Q9BVG3 475 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 NRP2O60462 931 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 LBPP18428 481 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 CASP7P55210 303 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 DNAJB14Q8TBM8 379 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 C12orf43Q96C57 262 aaKnown RBP17.27■□□□□ 0.36
SREBF1-203ENST00000395751 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 DBNDD1Q9H9R9 158 aa17.27■□□□□ 0.36
SREBF1-203ENST00000395751 HTR3EA5X5Y0 456 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 TSPAN4O14817 238 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 PRKD3O94806 890 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 HOXD12P35452 270 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 RPS9P46781 194 aaKnown RBP17.27■□□□□ 0.35
SREBF1-203ENST00000395751 NR6A1Q15406 480 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 GOLGA7BQ2TAP0 167 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 TYW3Q6IPR3 259 aaKnown RBP17.27■□□□□ 0.35
SREBF1-203ENST00000395751 PARP8Q8N3A8 854 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 AADATQ8N5Z0 425 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 C1orf21Q9H246 121 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.27■□□□□ 0.355e-7■■■□□ 16.2
SREBF1-203ENST00000395751 FETUBQ9UGM5 382 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 TMCC3Q9ULS5 477 aa17.27■□□□□ 0.35
SREBF1-203ENST00000395751 VDRP11473 427 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 FGFR2P21802 821 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 NR2C2P49116 596 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 CLCN2P51788 898 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 MYDGFQ969H8 173 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 NXNL1Q96CM4 212 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 CGRRF1Q99675 332 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 EHD1Q9H4M9 534 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 PCDHGC3Q9UN70 934 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 IL18RAPO95256 599 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 RECQLP46063 649 aaPredicted RBP17.26■□□□□ 0.35
SREBF1-203ENST00000395751 RGS4P49798 205 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 TAS2R40P59535 323 aa17.26■□□□□ 0.35
SREBF1-203ENST00000395751 LIPMQ5VYY2 423 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms