RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 TMPRSS4Q9NRS4 437 aa16.4■□□□□ 0.22
MUC1-201ENST00000337604 ARHGEF38Q9NXL2 777 aa16.4■□□□□ 0.22
MUC1-201ENST00000337604 SLC25A13Q9UJS0 675 aa16.4■□□□□ 0.22
MUC1-201ENST00000337604 VPS28Q9UK41 221 aa16.4■□□□□ 0.22
MUC1-201ENST00000337604 TPX2Q9ULW0 747 aaKnown RBP16.4■□□□□ 0.22
MUC1-201ENST00000337604 SNX10Q9Y5X0 201 aa16.4■□□□□ 0.22
MUC1-201ENST00000337604 IGSF10Q6WRI0 2623 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SMG1Q96Q15 3661 aaKnown RBP16.39■□□□□ 0.21
MUC1-201ENST00000337604 DOCK4Q8N1I0 1966 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.39■□□□□ 0.21
MUC1-201ENST00000337604 TRABD2BA6NFA1 517 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 TLR4O00206 839 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 RNF103O00237 685 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 ENC1O14682 589 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SLC7A4O43246 635 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SNAP91O60641 907 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 CLDN11O75508 207 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 MT-CO1P00395 513 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SRCP12931 536 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 MAT2AP31153 395 aaKnown RBP16.39■□□□□ 0.21
MUC1-201ENST00000337604 CDH5P33151 784 aaPredicted RBP16.39■□□□□ 0.21
MUC1-201ENST00000337604 KRT9P35527 623 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 TAS2R38P59533 333 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 ZNF177Q13360 481 aaPredicted RBP16.39■□□□□ 0.21
MUC1-201ENST00000337604 MAN2A1Q16706 1144 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 COL28A1Q2UY09 1125 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 ACCSLQ4AC99 568 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SMYD5Q6GMV2 418 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 TRNP1Q6NT89 227 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 TRIM69Q86WT6 500 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 PIP4K2CQ8TBX8 421 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 NT5C3BQ969T7 300 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SKA1Q96BD8 255 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 SIK2Q9H0K1 926 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 HS3ST2Q9Y278 367 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 CA5BQ9Y2D0 317 aa16.39■□□□□ 0.21
MUC1-201ENST00000337604 K7ERQ8 282 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 MCF2LO15068 1137 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 ALOX15BO15296 676 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 ITGAVP06756 1048 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 CXCR3P49682 368 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 ACADVLP49748 655 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 CDH4P55283 916 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 CYP4F3Q08477 520 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 BNIP3Q12983 259 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 MTA1Q13330 715 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 COL9A2Q14055 689 aaPredicted RBP16.38■□□□□ 0.21
MUC1-201ENST00000337604 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 PIP5KL1Q5T9C9 394 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 DSG4Q86SJ6 1040 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 EID2Q8N6I1 236 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 CNDP2Q96KP4 475 aaKnown RBP16.38■□□□□ 0.21
MUC1-201ENST00000337604 TBCBQ99426 244 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 TKTL2Q9H0I9 626 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 SYNCQ9H7C4 482 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 VPS51Q9UID3 782 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 PCDHGA1Q9Y5H4 931 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
MUC1-201ENST00000337604 ASXL3Q9C0F0 2248 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 A0A0D9SEW6 157 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 YKT6O15498 198 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 BNIP3LO60238 219 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 LDOC1O95751 146 aaPredicted RBP16.37■□□□□ 0.21
MUC1-201ENST00000337604 FLT3P36888 993 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 GABRB2P47870 512 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 RXRGP48443 463 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 SULT1E1P49888 294 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
MUC1-201ENST00000337604 KCNMA1Q12791 1236 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 DRAP1Q14919 205 aaPredicted RBP16.37■□□□□ 0.21
MUC1-201ENST00000337604 C2CD6Q53TS8 623 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 HSP90AA4PQ58FG1 418 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 BRMS1LQ5PSV4 323 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 FAM46CQ5VWP2 391 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 XYLT1Q86Y38 959 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 MFSD2AQ8NA29 543 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 OR2A12Q8NGT7 310 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 TSC1Q92574 1164 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 PGAP3Q96FM1 320 aaPredicted RBP16.37■□□□□ 0.21
MUC1-201ENST00000337604 MUC3BQ9H195 1237 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 ERVMER34-1Q9H9K5 563 aa16.37■□□□□ 0.21
MUC1-201ENST00000337604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.37■□□□□ 0.21
MUC1-201ENST00000337604 DRGXA6NNA5 263 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 C1QTNF3-AMACRE9PGA6 284 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 SMAD6O43541 496 aaKnown RBP16.36■□□□□ 0.21
MUC1-201ENST00000337604 RFPL3O75679 317 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 RHOCP08134 193 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 CYP11B1P15538 503 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 RRM1P23921 792 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 ARRB1P49407 418 aaPredicted RBP16.36■□□□□ 0.21
MUC1-201ENST00000337604 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 SLC45A4Q5BKX6 768 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 BNIPLQ7Z465 357 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 TFAP2DQ7Z6R9 452 aa16.36■□□□□ 0.21
MUC1-201ENST00000337604 PRPF39Q86UA1 669 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms