RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 CBX4O00257 560 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 MTSS1O43312 755 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ALDH1A3P47895 512 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 CD151P48509 253 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 PRKAA1Q13131 559 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 MAGEE2Q8TD90 523 aaPredicted RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 AZIN2Q96A70 460 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 RMND5BQ96G75 393 aaPredicted RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 VPS45Q9NRW7 570 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 WWOXQ9NZC7 414 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 CROTQ9UKG9 612 aa13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
TUBGCP2-210ENST00000543663 RASSF9O75901 435 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TRUB2O95900 331 aaKnown RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 APOA1P02647 267 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 WNT7BP56706 349 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 PDK3Q15120 406 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 KYAT1Q16773 422 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 MRNIPQ6NTE8 343 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TRMT10BQ6PF06 316 aaKnown RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZPBP2Q6X784 338 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 RRM2BQ7LG56 351 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 PIGZQ86VD9 579 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 GAD1Q99259 594 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 POMKQ9H5K3 350 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SEMA4BQ9NPR2 832 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SPASTQ9UBP0 616 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 AP3B1O00203 1094 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 UGT1A9O60656 530 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 LGALS2P05162 132 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 RALGPS1Q5JS13 557 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TTC30AQ86WT1 665 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 NPAS2Q99743 824 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 KIAA1257Q9ULG3 409 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 ATP11BQ9Y2G3 1177 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 MYH11P35749 1972 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 TUBP50607 506 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 NEK2P51955 445 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 ATXN1P54253 815 aaKnown RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 BFSP2Q13515 415 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 PFKFB4Q16877 469 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 LBX2Q6XYB7 198 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 DNERQ8NFT8 737 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 OR52K2Q8NGK3 314 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 SYT15Q9BQS2 421 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 ZBED2Q9BTP6 218 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 CYP3A43Q9HB55 503 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 PTPRJQ12913 1337 aa13.16□□□□□ -0.3
TUBGCP2-210ENST00000543663 CCL22O00626 93 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 DEAF1O75398 565 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 DLGAP3O95886 979 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 NFKB1P19838 968 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 GRIA4P48058 902 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 IL5RAQ01344 420 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CDH17Q12864 832 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CERCAMQ5T4B2 595 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 WSCD1Q658N2 575 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 VSTM1Q6UX27 236 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 JADE3Q92613 823 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CERS2Q96G23 380 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 ACE2Q9BYF1 805 aaPredicted RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 AAR2Q9Y312 384 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CLASP2O75122 1294 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 RGS20O76081 388 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 ASS1P00966 412 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 APOA4P06727 396 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CCDC166P0CW27 439 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 COX4I1P13073 169 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 PSMB9P28065 219 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 GEMP55040 296 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 RBM44Q6ZP01 1051 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 FNDC5Q8NAU1 212 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 EXOC2Q96KP1 924 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 CRLS1Q9UJA2 301 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.3
TUBGCP2-210ENST00000543663 FAM32AQ9Y421 112 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms