RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CYB5R4Q7L1T6 521 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 CNGA4Q8IV77 575 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 NAXEQ8NCW5 288 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 NCSTNQ92542 709 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 HTRA1Q92743 480 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 CUL5Q93034 780 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 SH3KBP1Q96B97 665 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 HVCN1Q96D96 273 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 RNFT2Q96EX2 444 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 SCNM1Q9BWG6 230 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 CTDSP1Q9GZU7 261 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 TAOK3Q9H2K8 898 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
CD46-216ENST00000490278 TCRBV7S3A2A0A539 114 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 DPPA5A6NC42 116 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 TMEM247A6NEH6 219 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 CXorf65A6NEN9 183 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 MASP2O00187 686 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 IFIT1P09914 478 aaKnown RBP4.29□□□□□ -1.72
CD46-216ENST00000490278 CTSAP10619 480 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PRKCHP24723 683 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 CHRNA5P30532 468 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PGM1P36871 562 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 CPA2P48052 419 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 SRSF4Q08170 494 aaKnown RBP4.29□□□□□ -1.72
CD46-216ENST00000490278 SUPT20HL1Q3ZLR7 823 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 VWA5B1Q5TIE3 1220 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PAPD7Q5XG87 772 aaKnown RBP4.29□□□□□ -1.72
CD46-216ENST00000490278 LRRC8DQ7L1W4 858 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PPM1MQ96MI6 270 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 SIGLEC11Q96RL6 698 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PIMREGQ9BSJ6 248 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 CADM1Q9BY67 442 aaKnown RBP4.29□□□□□ -1.72
CD46-216ENST00000490278 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 Q9N2J8 555 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 PAPOLBQ9NRJ5 636 aaKnown RBP4.29□□□□□ -1.72
CD46-216ENST00000490278 HSF4Q9ULV5 492 aa4.29□□□□□ -1.72
CD46-216ENST00000490278 ZNF335Q9H4Z2 1342 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 SH2D7A6NKC9 451 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 CGB1A6NKQ9 187 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 E5RJQ4 531 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 F8W810 466 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 UGDHO60701 494 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 WNT1P04628 370 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 HNRNPA1P09651 372 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD46-216ENST00000490278 PRR35P0CG20 571 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 KELP23276 732 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 HNF1BP35680 557 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 GJC1P36383 396 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TUBP50607 506 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 ID2Q02363 134 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 ZNF91Q05481 1191 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TBX2Q13207 712 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 IL13RA2Q14627 380 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 AP5B1Q2VPB7 878 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 PLK5Q496M5 336 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 C5orf22Q49AR2 442 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 SH2D4BQ5SQS7 431 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 FAM171A1Q5VUB5 890 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 ISM2Q6H9L7 571 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 AADACL2Q6P093 401 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 DEF8Q6ZN54 512 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TMEM217Q8N7C4 229 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 LSM14AQ8ND56 463 aaKnown RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 KAT2AQ92830 837 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 CLMNQ96JQ2 1002 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 SEC62Q99442 399 aaKnown RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 CD180Q99467 661 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 PHF7Q9BWX1 381 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 NPLQ9BXD5 320 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 FRMD8Q9BZ67 464 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.28□□□□□ -1.72
CD46-216ENST00000490278 MROH8Q9H579 483 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TTC12Q9H892 705 aaPredicted RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 UBN1Q9NPG3 1134 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TMEM45AQ9NWC5 275 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 ALKBH4Q9NXW9 302 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 UPB1Q9UBR1 384 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 ZNF69Q9UC07 566 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 CNOT7Q9UIV1 285 aaKnown RBP4.28□□□□□ -1.72
CD46-216ENST00000490278 ANAPC4Q9UJX5 808 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 TBX20Q9UMR3 447 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 LAMP3Q9UQV4 416 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 FRMD4BQ9Y2L6 1034 aa4.28□□□□□ -1.72
CD46-216ENST00000490278 FAM90A7PA6NKC0 464 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 A6NLC8 198 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 C17orf100A8MU93 164 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 FAM90A22PA8MWA6 464 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 FAM90A12PA8MX19 464 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 FAM90A23PA8MXZ1 464 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 RHODO00212 210 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 PRPF4O43172 522 aaKnown RBP eCLIP4.27□□□□□ -1.73
CD46-216ENST00000490278 STRNO43815 780 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 HBP1O60381 514 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 TULP3O75386 442 aa4.27□□□□□ -1.73
CD46-216ENST00000490278 NEURL1O76050 574 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms