RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NOL3O60936 208 aaKnown RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 BCAS2O75934 225 aaPredicted RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 VAPBO95292 243 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 CD19P15391 556 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 NLRP11P59045 1033 aaKnown RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 PMS2P3Q13401 168 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TKFCQ3LXA3 575 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TREML2Q5T2D2 321 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 THNSL1Q8IYQ7 743 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 R3HDMLQ9H3Y0 253 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 ELP3Q9H9T3 547 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 GIN1Q9NXP7 522 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TUBA8Q9NY65 449 aaPredicted RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 HTRA2O43464 458 aaPredicted RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 BAIAP3O94812 1187 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 CCR10P46092 362 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TUBA4AP68366 448 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 FSTL1Q12841 308 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 RALGDSQ12967 914 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 VGLL4Q14135 290 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TMEM132BQ14DG7 1078 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 CDO1Q16878 200 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 EPGNQ6UW88 154 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 HACE1Q8IYU2 909 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 CHPT1Q8WUD6 406 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZMAT2Q96NC0 199 aaKnown RBP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 EHMT1Q9H9B1 1298 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 XPNPEP3Q9NQH7 507 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 STAU2Q9NUL3 570 aaKnown RBP eCLIP15□□□□□ -0.01
NCKIPSD-204ENST00000416649 PAK5Q9P286 719 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 TXNDC16Q9P2K2 825 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 CROTQ9UKG9 612 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 GIT1Q9Y2X7 761 aa15□□□□□ -0.01
NCKIPSD-204ENST00000416649 AKAP10O43572 662 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 TIPRLO75663 272 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 BMP10O95393 424 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 MIPP30301 263 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 LIG4P49917 911 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 CLCN2P51788 898 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 CREB5Q02930 508 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 GADL1Q6ZQY3 521 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 HERC6Q8IVU3 1022 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 GPC2Q8N158 579 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 TRPC4APQ8TEL6 797 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 AGAP3Q96P47 875 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 FRMD8Q9BZ67 464 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 CCDC68Q9H2F9 335 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 TPK1Q9H3S4 243 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 LAMA3Q16787 3333 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 KRBA1A5PL33 1030 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 TPST1O60507 370 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ESRRBO95718 433 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 JAK1P23458 1154 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 MPSTP25325 297 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ABCG1P45844 678 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 IREB2P48200 963 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 SNRPFP62306 86 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 LSM12Q3MHD2 195 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 NAPRTQ6XQN6 538 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZC3H7AQ8IWR0 971 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 SIX6OS1Q8N1H7 587 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 HM13Q8TCT9 377 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 DHRS1Q96LJ7 313 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ACO2Q99798 780 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ATAD3AQ9NVI7 634 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 RBAKQ9NYW8 714 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 PSAT1Q9Y617 370 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 WDR27A2RRH5 827 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 FAM159BA6NKW6 160 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 KCNH1O95259 989 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 CHRNGP07510 517 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 HSD17B4P51659 736 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 RAB15P59190 212 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 PGM5Q15124 567 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 DCLRE1AQ6PJP8 1040 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 APOBEC3FQ8IUX4 373 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 PGAM4Q8N0Y7 254 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 CYGBQ8WWM9 190 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 APBB2Q92870 758 aa14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZBTB45Q96K62 511 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 EBNA1BP2Q99848 306 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-204ENST00000416649 C4BPAP04003 597 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 PABPC1P11940 636 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 TFE3P19532 575 aaPredicted RBP14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 NR4A1P22736 598 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 YAP1P46937 504 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 CNTN2Q02246 1040 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 RAB39AQ14964 217 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 BCL2A1Q16548 175 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 CCDC153Q494R4 210 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 ZBTB41Q5SVQ8 909 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 LAYNQ6UX15 382 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 TMCO5AQ8N6Q1 288 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 OR5B17Q8NGF7 314 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 ITPKCQ96DU7 683 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
NCKIPSD-204ENST00000416649 SYT17Q9BSW7 474 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms