RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SYNGAP1Q96PV0 1343 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 SCN4AP35499 1836 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 LOC390937A0A1W2PQ73 354 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 PSMD9O00233 223 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 TSPAN4O14817 238 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 TSC22D2O75157 780 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 RB1P06400 928 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 POLR2MP0CAP2 368 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 COX5BP10606 129 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 PRKAR1AP10644 381 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 NPR1P16066 1061 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 MAOBP27338 520 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 TYK2P29597 1187 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 CCND2P30279 289 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 CHRNA5P30532 468 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 MRPS9P82933 396 aaKnown RBP5.34□□□□□ -1.56
HERC4-205ENST00000412272 CYP4F8P98187 520 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 GALNT2Q10471 571 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 STRN3Q13033 797 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 ADGRE1Q14246 886 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 GRM7Q14831 915 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 PCBP1Q15365 356 aaKnown RBP eCLIP5.34□□□□□ -1.56
HERC4-205ENST00000412272 BRMS1LQ5PSV4 323 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 PIK3R6Q5UE93 754 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 KYAT3Q6YP21 454 aaKnown RBP5.34□□□□□ -1.56
HERC4-205ENST00000412272 GALNT5Q7Z7M9 940 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 RNF180Q86T96 592 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 ERO1BQ86YB8 467 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 KLHL36Q8N4N3 616 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 LRRC20Q8TCA0 184 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 NGLY1Q96IV0 654 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 BCL7BQ9BQE9 202 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 KIFC1Q9BW19 673 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.34□□□□□ -1.56
HERC4-205ENST00000412272 PRDM9Q9NQV7 894 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 GIMAP2Q9UG22 337 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 NEU2Q9Y3R4 380 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 PCDHA3Q9Y5H8 950 aa5.34□□□□□ -1.56
HERC4-205ENST00000412272 ZNFX1Q9P2E3 1918 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 SYNDIG1LA6NDD5 238 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 EVPLLA8MZ36 301 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 LEUTXA8MZ59 168 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 USP12O75317 370 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PSIP1O75475 530 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 PALMO75781 387 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 TNFAIP8O95379 198 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 IL6P05231 212 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 ITIH2P19823 946 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 CIITAP33076 1130 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 GJC1P36383 396 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 MAGEA1P43355 309 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 IFI35P80217 286 aaPredicted RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 GRB10Q13322 594 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PITRM1Q5JRX3 1037 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 NIPA1Q7RTP0 329 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 GRAMD1CQ8IYS0 662 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 C4orf33Q8N1A6 199 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PCSK9Q8NBP7 692 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 TRPM4Q8TD43 1214 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 UTP15Q8TED0 518 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 ISOC1Q96CN7 298 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 CRAMP1Q96RY5 1269 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 RIT2Q99578 217 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 TRIM62Q9BVG3 475 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 SLA2Q9H6Q3 261 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 SAGE1Q9NXZ1 904 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 KLHL9Q9P2J3 617 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 MBD1Q9UIS9 605 aaPredicted RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 TECPR2O15040 1411 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 NRXN3Q9Y4C0 1643 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 POTEB3A0JP26 581 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 ARGFXA6NJG6 315 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 MEI4A8MW99 385 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PSMD12O00232 456 aaPredicted RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 CTDSP2O14595 271 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PRPF4O43172 522 aaKnown RBP eCLIP5.33□□□□□ -1.561e-6■■■□□ 14.7
HERC4-205ENST00000412272 RIPK2O43353 540 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 DYRK3O43781 588 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 IDH1O75874 414 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 AKR1B1P15121 316 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 IFNAR1P17181 557 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 CXCR5P32302 372 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 GALNSP34059 522 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 SULT1E1P49888 294 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 KCNJ10P78508 379 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 CYP27A1Q02318 531 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 KCNMA1Q12791 1236 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 TRMT5Q32P41 509 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 POTEBQ6S5H4 581 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 DMRTC2Q8IXT2 367 aaPredicted RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 POC1BQ8TC44 478 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 FAM172AQ8WUF8 416 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 TESCQ96BS2 214 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 MAGEF1Q9HAY2 307 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 RAVER2Q9HCJ3 691 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 SSU72Q9NP77 194 aaKnown RBP5.33□□□□□ -1.56
HERC4-205ENST00000412272 COPRSQ9NQ92 184 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 PRDM8Q9NQV8 689 aa5.33□□□□□ -1.56
HERC4-205ENST00000412272 AFF4Q9UHB7 1163 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms