RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SLC4A4Q9Y6R1 1079 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 CACNA1DQ01668 2161 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PHLPP2Q6ZVD8 1323 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 MYO5AQ9Y4I1 1855 aaKnown RBP5.94□□□□□ -1.46
AP3S1-202ENST00000395548 ATG2BQ96BY7 2078 aa5.94□□□□□ -1.46
AP3S1-202ENST00000395548 PLIN4Q96Q06 1357 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PTPRBP23467 1997 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 GOLGA4Q13439 2230 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 A0A0A6YYJ9 748 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 UBE2QL1A1L167 161 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 DYTNA2CJ06 578 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SPECC1L-ADORA2AF8WAN1 911 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 ANP32CO43423 234 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 EPB41L2O43491 1005 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 APOL3O95236 402 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 C1SP09871 688 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SFTPCP11686 197 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 MARK3P27448 753 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 CCND2P30279 289 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 HNF1BP35680 557 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SLC11A1P49279 550 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 CRYBB1P53674 252 aaPredicted RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 DGCR2P98153 550 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 TLE1Q04724 770 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 KLF10Q13118 480 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 STK3Q13188 491 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 BIRC3Q13489 604 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 TUBA3CQ13748 450 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 FHL2Q14192 279 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 GBX1Q14549 363 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PON2Q15165 354 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PTPAQ15257 358 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SMAD1Q15797 465 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 NOMO2Q5JPE7 1267 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 ESRP1Q6NXG1 681 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 TUBA3EQ6PEY2 450 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 MMS22LQ6ZRQ5 1243 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 RTL10Q7L3V2 364 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PPHLN1Q8NEY8 458 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 OR2W6PQ8NHA6 318 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SPATA20Q8TB22 786 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 CACTINQ8WUQ7 758 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 SNRNP27Q8WVK2 155 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 ING5Q8WYH8 240 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 GJA10Q969M2 543 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 FAM193BQ96PV7 902 aaPredicted RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PDCD2LQ9BRP1 358 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 TMEM175Q9BSA9 504 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PITHD1Q9GZP4 211 aaPredicted RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 DACT1Q9NYF0 836 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 COL20A1Q9P218 1284 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 DNAI1Q9UI46 699 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 TLN1Q9Y490 2541 aaKnown RBP5.93□□□□□ -1.46
AP3S1-202ENST00000395548 WDR81Q562E7 1941 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 ZBED9Q6R2W3 1325 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 PDZD2O15018 2839 aa5.93□□□□□ -1.46
AP3S1-202ENST00000395548 F8P00451 2351 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 FAM149AA5PLN7 773 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 SLC38A8A6NNN8 435 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 NEMP1O14524 444 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CHADO15335 359 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CCL16O15467 120 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 PIP5K1CO60331 668 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CBFA2T3O75081 653 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 ATP9AO75110 1047 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 STAM2O75886 525 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 TOX4O94842 621 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 PF4V1P10720 104 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CD40P25942 277 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 TCF7P36402 384 aaPredicted RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 SCNN1BP51168 640 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 INHBCP55103 352 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 GEMIN4P57678 1058 aaKnown RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 ADAM8P78325 824 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 DSG1Q02413 1049 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 GRSF1Q12849 480 aaKnown RBP eCLIP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MTX1Q13505 466 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 GTF2H3Q13889 308 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 GRM3Q14832 879 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 SEPT7Q16181 437 aaKnown RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CREB3L3Q68CJ9 461 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 VITQ6UXI7 678 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 HAUS6Q7Z4H7 955 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 FAM228AQ86W67 206 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MARCH9Q86YJ5 346 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MFSD6LQ8IWD5 586 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 ZNF248Q8NDW4 579 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 ENGASEQ8NFI3 743 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 URGCPQ8TCY9 931 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 SETD7Q8WTS6 366 aaKnown RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MBOAT7Q96N66 472 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 CLSTN3Q9BQT9 956 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MENTQ9BUN1 341 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 MTG2Q9H4K7 406 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 TCF7L1Q9HCS4 588 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 NLRC4Q9NPP4 1024 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 STARD5Q9NSY2 213 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 TBC1D13Q9NVG8 400 aa5.92□□□□□ -1.46
AP3S1-202ENST00000395548 FBXO2Q9UK22 296 aaPredicted RBP5.92□□□□□ -1.46
AP3S1-202ENST00000395548 FBXW11Q9UKB1 542 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms