RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 NELFEP18615 380 aaKnown RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 TCN1P20061 433 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 SLC7A1P30825 629 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 SPRP35270 261 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 NR2C2P49116 596 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 PRKAA2P54646 552 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 TRAP1Q12931 704 aaKnown RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 CDO1Q16878 200 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 C15orf59Q2T9L4 293 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 IRAK1BP1Q5VVH5 260 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 HEATR6Q6AI08 1181 aaKnown RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 NIPAL1Q6NVV3 410 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 ZPBP2Q6X784 338 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 FASTKD5Q7L8L6 764 aaKnown RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 HACE1Q8IYU2 909 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 FAM47BQ8NA70 645 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 DOK1Q99704 481 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 GATA5Q9BWX5 397 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 DRC3Q9H069 523 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 XYLT2Q9H1B5 865 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 C20orf96Q9NUD7 363 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 ADA2Q9NZK5 511 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 DOCK5Q9H7D0 1870 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 GIPC1O14908 333 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 MICAL2O94851 1124 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 CSPG5O95196 566 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 POLBP06746 335 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 TFPTP0C1Z6 253 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 COL6A2P12110 1019 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 MPSTP25325 297 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 CCND2P30279 289 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 ARL2P36404 184 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 CDH15P55291 814 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 PRKAA1Q13131 559 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 PPIL2Q13356 520 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 NHSL2Q5HYW2 709 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 PPP4R4Q6NUP7 873 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 SCYL2Q6P3W7 929 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 CMC1Q7Z7K0 106 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 PLD6Q8N2A8 252 aaKnown RBP11.72□□□□□ -0.53
TROAP-201ENST00000257909 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 ZSCAN18Q8TBC5 510 aaPredicted RBP11.72□□□□□ -0.53
TROAP-201ENST00000257909 CHPT1Q8WUD6 406 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 TFAP2CQ92754 450 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 RBBP8Q99708 897 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 JPH1Q9HDC5 661 aaPredicted RBP11.72□□□□□ -0.53
TROAP-201ENST00000257909 EIF2B3Q9NR50 452 aaKnown RBP11.72□□□□□ -0.53
TROAP-201ENST00000257909 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 OXSMQ9NWU1 459 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 GNPTGQ9UJJ9 305 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 CROCCQ5TZA2 2017 aa11.72□□□□□ -0.53
TROAP-201ENST00000257909 M0QYV0 167 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 MDM4O15151 490 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 ZBTB11O95625 1053 aaPredicted RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 KCNA2P16389 499 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TFEBP19484 476 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 GPD2P43304 727 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 GJA8P48165 433 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 CRADDP78560 199 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TFAMQ00059 246 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 MOGQ16653 247 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RAB6CQ53S08 254 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TTC33Q6PID6 262 aaPredicted RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 ZNF354CQ86Y25 554 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 CENPSQ8N2Z9 138 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TBC1D15Q8TC07 691 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RDH11Q8TC12 318 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 CERS2Q96G23 380 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 QKIQ96PU8 341 aaKnown RBP eCLIP11.71□□□□□ -0.53
TROAP-201ENST00000257909 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 GPATCH1Q9BRR8 931 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 TCHPQ9BT92 498 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RAB6CQ9H0N0 254 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 CXorf21Q9HAI6 301 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 NMRAL1Q9HBL8 299 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RAVER2Q9HCJ3 691 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 GPATCH2LQ9NWQ4 482 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 CDC14AQ9UNH5 594 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
TROAP-201ENST00000257909 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TRIM64A6NGJ6 449 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 PIK3R2O00459 728 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 ATE1O95260 518 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 TNNC2P02585 160 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 EDN1P05305 212 aa11.71□□□□□ -0.53
TROAP-201ENST00000257909 INHBBP09529 407 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms