RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 NAT9Q9BTE0 207 aa13.4□□□□□ -0.26
BRF1-222ENST00000635152 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
BRF1-222ENST00000635152 SIK2Q9H0K1 926 aa13.4□□□□□ -0.26
BRF1-222ENST00000635152 DCDC2Q9UHG0 476 aa13.4□□□□□ -0.26
BRF1-222ENST00000635152 BPTFQ12830 3046 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 M0QZ92 97 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 UPP2O95045 317 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 JCHAINP01591 159 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 PRKCGP05129 697 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 NFKB1P19838 968 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 BDNFP23560 247 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 ARRB2P32121 409 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 RWDD4Q6NW29 188 aaKnown RBP13.39□□□□□ -0.27
BRF1-222ENST00000635152 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 PDZD4Q76G19 769 aaPredicted RBP13.39□□□□□ -0.27
BRF1-222ENST00000635152 POU5F2Q8N7G0 328 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRF1-222ENST00000635152 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.273e-7■■■■■ 30.9
BRF1-222ENST00000635152 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 LRRC40Q9H9A6 602 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 ARL5CA6NH57 179 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 LRIG2O94898 1065 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 AP2A1O95782 977 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 POMCP01189 267 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 GNAT1P11488 350 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 LHX1P48742 406 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 ARL13BQ3SXY8 428 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 TIGD5Q53EQ6 642 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 GNASQ5JWF2 1037 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 FSTL4Q6MZW2 842 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 ACMSDQ8TDX5 336 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 STMN2Q93045 179 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 OXCT2Q9BYC2 517 aaPredicted RBP13.39□□□□□ -0.27
BRF1-222ENST00000635152 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 COPG2Q9UBF2 871 aa13.39□□□□□ -0.27
BRF1-222ENST00000635152 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 B3GAT3O94766 335 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 FBXO21O94952 628 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 PROCP04070 461 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 CCNG1P51959 295 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 IRF9Q00978 393 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SEMA3BQ13214 749 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 TAF1CQ15572 869 aaPredicted RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 GPR162Q16538 588 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 TMPRSS6Q8IU80 811 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 ACVR1CQ8NER5 493 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 CPNE1Q99829 537 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 MLPHQ9BV36 600 aaPredicted RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 CCDC106Q9BWC9 280 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 TAGLN3Q9UI15 199 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SF3B1O75533 1304 aaKnown RBP eCLIP13.38□□□□□ -0.27
BRF1-222ENST00000635152 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SERPINA6P08185 405 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 RALBP11234 206 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 BRCC3P46736 316 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 MRPS6P82932 125 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 PPIDQ08752 370 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SPANXN3Q5MJ09 141 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 OTOP3Q7RTS5 596 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.38□□□□□ -0.279e-7■■■■■ 51.2
BRF1-222ENST00000635152 PPP4R1Q8TF05 950 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 MYLPFQ96A32 169 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SLC9A7Q96T83 725 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 SLC38A7Q9NVC3 462 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 ZCWPW2A0A1B0GU75 182 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 DFFAO00273 331 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 TBX10O75333 385 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 PGK1P00558 417 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SERPINE1P05121 402 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 PDHA1P08559 390 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 SCAMP5Q8TAC9 235 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 NTAN1Q96AB6 310 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 RBBP8Q99708 897 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 EPAS1Q99814 870 aa13.38□□□□□ -0.27
BRF1-222ENST00000635152 IARS2Q9NSE4 1012 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
BRF1-222ENST00000635152 PSMG1O95456 288 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
BRF1-222ENST00000635152 CPA3P15088 417 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 USP4Q13107 963 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 GRTP1Q5TC63 336 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 SNX30Q5VWJ9 437 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 AGMOQ6ZNB7 445 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 ARHGAP36Q6ZRI8 547 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 MAVSQ7Z434 540 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 KDELC2Q7Z4H8 507 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 SPATA22Q8NHS9 363 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 SHKBP1Q8TBC3 707 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
BRF1-222ENST00000635152 SMARCD1Q96GM5 515 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms