RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 FRMD6Q96NE9 622 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 MCMBPQ9BTE3 642 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 BEGAINQ9BUH8 593 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 CHID1Q9BWS9 393 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 DCLK3Q9C098 648 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 ZCCHC2Q9C0B9 1178 aaKnown RBP5.3□□□□□ -1.56
SNHG1-218ENST00000541615 GHITMQ9H3K2 345 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 STN1Q9H668 368 aaKnown RBP5.3□□□□□ -1.56
SNHG1-218ENST00000541615 NARFLQ9H6Q4 476 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PHAXQ9H814 394 aaKnown RBP5.3□□□□□ -1.56
SNHG1-218ENST00000541615 NHEJ1Q9H9Q4 299 aaPredicted RBP5.3□□□□□ -1.56
SNHG1-218ENST00000541615 ZNF556Q9HAH1 456 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 IFT46Q9NQC8 304 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PCDHB16Q9NRJ7 776 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PNPLA3Q9NST1 481 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 LRRC4BQ9NT99 713 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 UFSP2Q9NUQ7 469 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 ING3Q9NXR8 418 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 TXNDC16Q9P2K2 825 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 ANKFY1Q9P2R3 1169 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 CYB5R1Q9UHQ9 305 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 CYTH4Q9UIA0 394 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 SH3BGRL2Q9UJC5 107 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 RPS6KA6Q9UK32 745 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 MAN1B1Q9UKM7 699 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 ERVK-19Q9WJR5 959 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 NEU2Q9Y3R4 380 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PCDHA5Q9Y5H7 936 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PCDHA13Q9Y5I0 950 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 PTPRUQ92729 1446 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM131LA2VDJ0 1609 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 KDM6BO15054 1643 aa5.3□□□□□ -1.56
SNHG1-218ENST00000541615 DNMT1P26358 1616 aaKnown RBP5.3□□□□□ -1.56
SNHG1-218ENST00000541615 DIP2AQ14689 1571 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CLUHO75153 1309 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 USP42Q9H9J4 1324 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ATP7AQ04656 1500 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ARAP3Q8WWN8 1544 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SSU72P8A0A1W2PR75 194 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ESYT3A0FGR9 886 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM120BA0PK00 339 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 FAM196BA6NMK8 535 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 J3QL48 77 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PGRMC1O00264 195 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PPM1DO15297 605 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CCNT2O60583 730 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DNAJA2O60884 412 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LRRN2O75325 713 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SEMA3DO95025 777 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TRIM16O95361 564 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 NADKO95544 446 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 BPNT1O95861 308 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PTTG1O95997 202 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 APOA1P02647 267 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LTA4HP09960 611 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ZBTB48P10074 688 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SRGNP10124 158 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 AKR1B1P15121 316 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TMEM11P17152 192 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 HOXB8P17481 243 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 PSMC3P17980 439 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CCNA2P20248 432 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TAC1P20366 129 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 FGFR2P21802 821 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAP4P27816 1152 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CD40LGP29965 261 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ECHS1P30084 290 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 BMPR1AP36894 532 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SPAM1P38567 509 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CEBPAP49715 358 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CLCN4P51793 760 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DGKQP52824 942 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KCNQ4P56696 695 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 YWHAGP61981 247 aaKnown RBP eCLIP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ERVK-9P63128 1117 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 INSM1Q01101 510 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TNFAIP2Q03169 654 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 CENPCQ03188 943 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 BST2Q10589 180 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DLG1Q12959 904 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 BNIP2Q12982 314 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 NR5A1Q13285 461 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SNTA1Q13424 505 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SNAPC2Q13487 334 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ELOAQ14241 798 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 FLOT2Q14254 428 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GALEQ14376 348 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 ANGPT1Q15389 498 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 SKIV2LQ15477 1246 aaKnown RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 TRIP13Q15645 432 aaPredicted RBP5.29□□□□□ -1.56
SNHG1-218ENST00000541615 DLG2Q15700 870 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 NAB2Q15742 525 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 GRIK4Q16099 956 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 MAPKAPK3Q16644 382 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 LRIT3Q3SXY7 679 aa5.29□□□□□ -1.56
SNHG1-218ENST00000541615 KLHL12Q53G59 568 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms