RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CPEB1Q9BZB8 566 aaKnown RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 CIPCQ9C0C6 399 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 LRRN3Q9H3W5 708 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 C6orf50Q9HD87 102 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 TNFRSF10DQ9UBN6 386 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 VAV3Q9UKW4 847 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PADI4Q9UM07 663 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 ATP6V1DQ9Y5K8 247 aa7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 MRPS18BQ9Y676 258 aaKnown RBP7.83□□□□□ -1.16
EXOSC3-206ENST00000489414 PRAMEF26H0Y7S4 382 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 MID1O15344 667 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 AQP9O43315 295 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 FGF3P11487 239 aaPredicted RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 NME1P15531 152 aaKnown RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 RXRAP19793 462 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 PROZP22891 400 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 RPS6KB1P23443 525 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 MAP4P27816 1152 aaKnown RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 PPP2R2BQ00005 443 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 SPAG1Q07617 926 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 EHHADHQ08426 723 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 ABHD18Q0P651 414 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 WSCD1Q658N2 575 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 DENND5BQ6ZUT9 1274 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 MRGPRGQ86SM5 289 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 SCN4BQ8IWT1 228 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 PARP9Q8IXQ6 854 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 NLGN4XQ8N0W4 816 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 ACBD4Q8NC06 268 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 NLGN4YQ8NFZ3 816 aaPredicted RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 OR14C36Q8NHC7 312 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 GLMNQ92990 594 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 CCDC74AQ96AQ1 378 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 IL12RB2Q99665 862 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 TCHPQ9BT92 498 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 DDA1Q9BW61 102 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 SPRY4Q9C004 299 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 ZSWIM4Q9H7M6 989 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 RGL1Q9NZL6 768 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 CYTH4Q9UIA0 394 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 UBQLN1Q9UMX0 589 aaKnown RBP7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 ZNF451Q9Y4E5 1061 aa7.82□□□□□ -1.16
EXOSC3-206ENST00000489414 GOLGA6L3A6NEY3 463 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 E2F3O00716 465 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 ABLIM1O14639 778 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 TIMM44O43615 452 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 PENKP01210 267 aaPredicted RBP7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 CSF2P04141 144 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 MCF2P10911 925 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 IRF1P10914 325 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 MCM5P33992 734 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 FOLH1Q04609 750 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 LBRQ14739 615 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 CCDC142Q17RM4 750 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 ADCK5Q3MIX3 580 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 FNDC3BQ53EP0 1204 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 WFDC11Q8NEX6 87 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 OR13H1Q8NG92 308 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 RELTQ969Z4 430 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 CEP295NLQ96MC4 621 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 ALPK1Q96QP1 1244 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 OMDQ99983 421 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 CALN1Q9BXU9 219 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 KIF3AQ9Y496 699 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 PCDHB3Q9Y5E6 796 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 PCDHGB7Q9Y5F8 929 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 RNF215Q9Y6U7 377 aa7.81□□□□□ -1.16
EXOSC3-206ENST00000489414 MDC1Q14676 2089 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 A6NCN8 305 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 CYB561D2O14569 222 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 RNGTTO60942 597 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 MBD3O95983 291 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 F8A1P23610 371 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 MAGEA11P43364 429 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 NAMPTP43490 491 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 RARRES1P49788 294 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ANTXR2P58335 489 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 NLRP5P59047 1200 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 NOP14P78316 857 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ARID5AQ03989 594 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TAF10Q12962 218 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 TRDNQ13061 729 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 CTTNQ14247 550 aaKnown RBP7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 ERV3-1Q14264 604 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 CST6Q15828 149 aa7.8□□□□□ -1.16
EXOSC3-206ENST00000489414 FYB2Q5VWT5 728 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms