RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ZNF778Q96MU6 729 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 TMEM209Q96SK2 561 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 NAT9Q9BTE0 207 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 MLPHQ9BV36 600 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 LRRC40Q9H9A6 602 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 RRAGCQ9HB90 399 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 SNX15Q9NRS6 342 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 BFARQ9NZS9 450 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 CDH9Q9ULB4 789 aa15.24■□□□□ 0.03
VIPAS39-202ENST00000343765 HOXC8P31273 242 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 DLG2Q15700 870 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 RAB41Q5JT25 222 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 SPANXN3Q5MJ09 141 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 BHLHA9Q7RTU4 235 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 APBA2Q99767 749 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 EPAS1Q99814 870 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 PRDM16Q9HAZ2 1276 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 TMLHEQ9NVH6 421 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 AKR1A1P14550 325 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 GNAZP19086 355 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 SCAPQ12770 1279 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 TAF11Q15544 211 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 TEDDM1Q5T9Z0 273 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 SCAMP5Q8TAC9 235 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 ACMSDQ8TDX5 336 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 WDR60Q8WVS4 1066 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 RTP3Q9BQQ7 232 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 CHRAC1Q9NRG0 131 aa15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-202ENST00000343765 ARHGAP42A6NI28 874 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PRR5-ARHGAP8B1AHC4 643 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 DFFAO00273 331 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 KRT36O76013 467 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PRKCGP05129 697 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 SAT1P21673 171 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 YY1P25490 414 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PCSK1P29120 753 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 CD52P31358 61 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PGM1P36871 562 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PGGT1BP53609 377 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ARHGAP8P85298 464 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 TRIM68Q6AZZ1 485 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ATG14Q6ZNE5 492 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 RSPH3Q86UC2 560 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PLD6Q8N2A8 252 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 RAB3IL1Q8TBN0 382 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 CPNE1Q99829 537 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 GBA3Q9H227 469 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PNPOQ9NVS9 261 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 DCDC2Q9UHG0 476 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 BPTFQ12830 3046 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 TSC2P49815 1807 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 MEI4A8MW99 385 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 CAPN14A8MX76 684 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 F8W810 466 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PROCP04070 461 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 MXRA7P84157 204 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 IRF9Q00978 393 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ITGA9Q13797 1035 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 RCN1Q15293 331 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 UPP1Q16831 310 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ANKRD20A4Q4UJ75 823 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ACSBG2Q5FVE4 666 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 ARHGAP36Q6ZRI8 547 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 OTOP3Q7RTS5 596 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 FAM161BQ96MY7 647 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 MYCBPQ99417 103 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 MTG1Q9BT17 334 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 SENP6Q9GZR1 1112 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 C20orf96Q9NUD7 363 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 PTCH2Q9Y6C5 1203 aa15.22■□□□□ 0.03
VIPAS39-202ENST00000343765 SHROOM3Q8TF72 1996 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 C9IYK1 514 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 MGEA5O60502 916 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 THPOP40225 353 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 GJA9P57773 515 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 FSTL4Q6MZW2 842 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 WDR75Q8IWA0 830 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ACVR1CQ8NER5 493 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 PIWIL2Q8TC59 973 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 DTX3LQ8TDB6 740 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 CLPTM1LQ96KA5 538 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 CXorf56Q9H5V9 222 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ACSS2Q9NR19 701 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 IARS2Q9NSE4 1012 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 NUDT5Q9UKK9 219 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ZNF236Q9UL36 1845 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ZCWPW2A0A1B0GU75 182 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ODC1P11926 461 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 MX2P20592 715 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 ARRB2P32121 409 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 PTDSS1P48651 473 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 AIF1P55008 147 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 GALNT2Q10471 571 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 NAB1Q13506 487 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 CCDC6Q16204 474 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 GRTP1Q5TC63 336 aa15.21■□□□□ 0.03
VIPAS39-202ENST00000343765 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms