RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ATXN2Q99700 1313 aaKnown RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 LIN7AO14910 233 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 LSM1O15116 133 aaKnown RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 IL18RAPO95256 599 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 GYPCP04921 128 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PDHA2P29803 388 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 CEBPGP53567 150 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 MAPK7Q13164 816 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PRMT9Q6P2P2 845 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 POU5F2Q8N7G0 328 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 SERAC1Q96JX3 654 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ACTR8Q9H981 624 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 LRRC14BA6NHZ5 514 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 AP1S2P56377 157 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PPP4CP60510 307 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 CYP4F2P78329 520 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 CYP4F3Q08477 520 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 EFEMP1Q12805 493 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 B3GNT6Q6ZMB0 384 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 HPS6Q86YV9 775 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 C7orf25Q9BPX7 421 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 CNPY3Q9BT09 278 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 NDUFAF1Q9Y375 327 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 MSH4O15457 936 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 SH3BGRLO75368 114 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 FAM9CQ8IZT9 166 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 IPCEF1Q8WWN9 437 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 MAML3Q96JK9 1138 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ELL3Q9HB65 397 aaPredicted RBP13.09□□□□□ -0.31
TTC39A-202ENST00000262676 ADPRHL2Q9NX46 363 aa13.09□□□□□ -0.31
TTC39A-202ENST00000262676 TSPAN3O60637 253 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 SGPL1O95470 568 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 DHRSXQ8N5I4 330 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 PURBQ96QR8 312 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 THG1LQ9NWX6 298 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 UBP1Q9NZI7 540 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 GSTK1Q9Y2Q3 226 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 TDRKHQ9Y2W6 561 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ZNF24P17028 368 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 CCR4P51679 360 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 CROCCP3Q8IVE0 287 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ARHGEF19Q8IW93 802 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 CLYBLQ8N0X4 340 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 RMI1Q9H9A7 625 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 MCUBQ9NWR8 336 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 NDOR1Q9UHB4 597 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 DDX20Q9UHI6 824 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 SLCO1B7G3V0H7 640 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 RASSF6Q6ZTQ3 369 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ZSWIM1Q9BR11 485 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 CDC42EP4Q9H3Q1 356 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 WDR41Q9HAD4 459 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 NKRFO15226 690 aaKnown RBP eCLIP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 GLP2RO95838 553 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 Q4G0T1 1027 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 LEMD2Q8NC56 503 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 LRRC40Q9H9A6 602 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 TCF7L2Q9NQB0 619 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 KIDINS220Q9ULH0 1771 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 F5H5T6 163 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 CEP68Q76N32 757 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ACOT1Q86TX2 421 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 HIPK1Q86Z02 1210 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 FIBCD1Q8N539 461 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 BPIFB6Q8NFQ5 453 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 ITFG1Q8TB96 612 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-202ENST00000262676 MNTQ99583 582 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 PLA2G4CQ9UP65 541 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 BCL9O00512 1426 aa13.08□□□□□ -0.32
TTC39A-202ENST00000262676 H3BMM5 538 aa13.07□□□□□ -0.32
TTC39A-202ENST00000262676 SEC22BO75396 215 aa13.07□□□□□ -0.32
TTC39A-202ENST00000262676 DBTP11182 482 aaKnown RBP13.07□□□□□ -0.32
TTC39A-202ENST00000262676 CCNA2P20248 432 aa13.07□□□□□ -0.32
TTC39A-202ENST00000262676 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
TTC39A-202ENST00000262676 RPTNQ6XPR3 784 aa13.07□□□□□ -0.32
TTC39A-202ENST00000262676 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms