RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM44	YPL030W	VMS1	Q04311	632 aa	Known RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	SSQ1	Q05931	657 aa	Predicted RBP	4.93	□□□□□ -1.62
TRM44	YPL030W	SFI1	Q12369	946 aa		4.93	□□□□□ -1.62
TRM44	YPL030W	COX6	P00427	148 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	SEC23	P15303	768 aa	Known RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	PET123	P17558	318 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	SLA1	P32790	1244 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	YRO2	P38079	344 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	SOL3	P38858	249 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	FTR1	P40088	404 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	DAN4	P47179	1161 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	GPI8	P49018	411 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	RRN11	Q04712	507 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	UBX5	Q06682	500 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	DNL4	Q08387	944 aa	Predicted RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	RIO1	Q12196	484 aa	Known RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	TPD3	P31383	635 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	ELM1	P32801	640 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	PXA1	P41909	870 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	OCA1	P50946	238 aa	Predicted RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	YNL058C	P53947	316 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	POB3	Q04636	552 aa	Known RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	NCR1	Q12200	1170 aa		4.92	□□□□□ -1.62
TRM44	YPL030W	AIR2	Q12476	344 aa	Known RBP	4.92	□□□□□ -1.62
TRM44	YPL030W	CYB2	P00175	591 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	AI4	P03878	556 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	MER1	P16523	270 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	MET4	P32389	672 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	SSO1	P32867	290 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	DLD1	P32891	587 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	NUP120	P35729	1037 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	APL6	P46682	809 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	TEA1	P47988	759 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	YAF9	P53930	226 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	MDM1	Q01846	1127 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	ENT2	Q05785	613 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	NNT1	Q05874	261 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	PMT7	Q06644	662 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	YOR352W	Q08816	343 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	CHS5	Q12114	671 aa	Known RBP	4.91	□□□□□ -1.62
TRM44	YPL030W	ENT1	Q12518	454 aa		4.91	□□□□□ -1.62
TRM44	YPL030W	TRM732	Q03496	1420 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	MPH3	P0CE00	602 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	CMP2	P14747	604 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	GLC3	P32775	704 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	ESL2	P36168	1195 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	UBP13	P38187	747 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	LAM5	P43560	674 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	NUP42	P49686	430 aa	Known RBP	4.9	□□□□□ -1.62
TRM44	YPL030W	EFM5	P53200	248 aa	Known RBP	4.9	□□□□□ -1.62
TRM44	YPL030W	CWC21	Q03375	135 aa	Known RBP	4.9	□□□□□ -1.62
TRM44	YPL030W	ECM11	Q04110	302 aa		4.9	□□□□□ -1.62
TRM44	YPL030W	PUF6	Q04373	656 aa	Known RBP	4.9	□□□□□ -1.62
TRM44	YPL030W	NUP145	P49687	1317 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	MSH1	P25846	959 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	UIP5	P36137	443 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	OTU2	P38747	307 aa	Known RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	GGA2	P38817	585 aa	Known RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	VPS41	P38959	992 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	CAJ1	P39101	391 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	SPR3	P41901	512 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	MET12	P46151	657 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	YJL171C	P46992	396 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	ATF2	P53296	535 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	REX2	P54964	269 aa	Known RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	FMP30	Q02883	468 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	SNZ1	Q03148	297 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	YML108W	Q03759	105 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	PHM6	Q05637	104 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	COG4	Q06096	861 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	SNU66	Q12420	587 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	LSO2	Q3E772	92 aa	Known RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	UGA3	P26370	528 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	MRE11	P32829	692 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	MAL31	P38156	614 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	MEP1	P40260	492 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	HOP2	P53187	214 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	UTP22	P53254	1237 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	TIM11	P81449	96 aa	Predicted RBP	4.89	□□□□□ -1.63
TRM44	YPL030W	MPC54	Q08550	464 aa		4.89	□□□□□ -1.63
TRM44	YPL030W	PRT1	P06103	763 aa	Known RBP	4.88	□□□□□ -1.63
TRM44	YPL030W	NAT1	P12945	854 aa	Known RBP	4.88	□□□□□ -1.63
TRM44	YPL030W	DIT2	P21595	489 aa		4.88	□□□□□ -1.63
TRM44	YPL030W	APN1	P22936	367 aa		4.88	□□□□□ -1.63
TRM44	YPL030W	RFC1	P38630	861 aa	Known RBP	4.88	□□□□□ -1.63
TRM44	YPL030W	PMC1	P38929	1173 aa	Predicted RBP	4.88	□□□□□ -1.63
TRM44	YPL030W	IRR1	P40541	1150 aa		4.88	□□□□□ -1.63
TRM44	YPL030W	MAD1	P40957	749 aa		4.88	□□□□□ -1.63
TRM44	YPL030W	YPR097W	Q06839	1073 aa		4.88	□□□□□ -1.63
TRM44	YPL030W	RKM1	Q08961	583 aa	Predicted RBP	4.88	□□□□□ -1.63
TRM44	YPL030W	GEA1	P47102	1408 aa	Predicted RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	DPS1	P04802	557 aa	Known RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	SUI3	P09064	285 aa	Known RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	MRC1	P25588	1096 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	PAP1	P29468	568 aa	Known RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	HXT5	P38695	592 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	MAM1	P40065	302 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	PHB1	P40961	287 aa		4.87	□□□□□ -1.63
TRM44	YPL030W	DCP2	P53550	970 aa	Known RBP	4.87	□□□□□ -1.63
TRM44	YPL030W	KRE28	Q04431	385 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms