RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B HNT2P49775 206 aa2.39□□□□□ -2.03
YOR343W-BYOR343W-B YKE2P52553 114 aa2.39□□□□□ -2.03
YOR343W-BYOR343W-B ISR1Q06098 443 aaKnown RBP2.39□□□□□ -2.03
YOR343W-BYOR343W-B SYT1Q06836 1226 aa2.39□□□□□ -2.03
YOR343W-BYOR343W-B WSC3Q12215 556 aa2.39□□□□□ -2.03
YOR343W-BYOR343W-B PIN4P34217 668 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YOR343W-BYOR343W-B BOI1P38041 980 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B NCL1P38205 684 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B RRN7P40992 514 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B PAP2P53632 584 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B LCB5Q06147 687 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B CBC2Q08920 208 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YOR343W-BYOR343W-B MSN1P22148 382 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B MSC7P38694 644 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B UTP8P53276 713 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B CTR9P89105 1077 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B GCR2Q01722 534 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B GYP1Q08484 637 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B TOP1P04786 769 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B RAD2P07276 1031 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B DUT1P33317 147 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B YHL050CP38721 697 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B YHR219WP38900 624 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B PUS4P48567 403 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B PIB1Q06651 286 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B NOC3Q07896 663 aaPredicted RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B PDC6P26263 563 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B CPS1P27614 576 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B UGO1Q03327 502 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B GPI13Q07830 1017 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B GLO4Q12320 285 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B DOM34P33309 386 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B ATG19P35193 415 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B AHP1P38013 176 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B TPS3P38426 1054 aaKnown RBP2.38□□□□□ -2.03
YOR343W-BYOR343W-B RAD55P38953 406 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B TY1A-MR1Q04215 440 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B MET32Q12041 191 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B GNT1Q12096 491 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B WHI5Q12416 295 aa2.38□□□□□ -2.03
YOR343W-BYOR343W-B MIP1P15801 1254 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B SCJ1P25303 377 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B TY1A-BLQ12266 440 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B MCX1P38323 520 aaPredicted RBP2.37□□□□□ -2.03
YOR343W-BYOR343W-B GUS1P46655 708 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
YOR343W-BYOR343W-B DSE4P53753 1117 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B SPO71Q03868 1245 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B CMR1Q12510 522 aaKnown RBP2.37□□□□□ -2.03
YOR343W-BYOR343W-B APM4Q99186 491 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B DBP5P20449 482 aaKnown RBP2.37□□□□□ -2.03
YOR343W-BYOR343W-B FIR1P40020 876 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B PTK2P47116 818 aaKnown RBP2.37□□□□□ -2.03
YOR343W-BYOR343W-B FAR11P53917 953 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B SCP160P06105 1222 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
YOR343W-BYOR343W-B PRP40P33203 583 aaKnown RBP2.37□□□□□ -2.03
YOR343W-BYOR343W-B PBY1P38254 753 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B EXO5P38289 585 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B OSH7P38755 437 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B ECM1P39715 212 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B PUN1Q06991 263 aa2.37□□□□□ -2.03
YOR343W-BYOR343W-B TRK1P12685 1235 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B GEM1P39722 662 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B MRPS18P42847 217 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B FRT1Q99332 602 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B NNK1P36003 928 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B AIM46P38885 310 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B ALD3P54114 506 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B GUP2Q08929 609 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B SSF2Q12153 453 aaPredicted RBP2.36□□□□□ -2.03
YOR343W-BYOR343W-B HAT1Q12341 374 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B HTS1P07263 546 aaKnown RBP2.36□□□□□ -2.03
YOR343W-BYOR343W-B IDI1P15496 288 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B CST6P40535 587 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B IRR1P40541 1150 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B POB3Q04636 552 aaKnown RBP2.36□□□□□ -2.03
YOR343W-BYOR343W-B NSE3Q05541 303 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B HRK1Q08732 759 aaKnown RBP2.36□□□□□ -2.03
YOR343W-BYOR343W-B YOL098CQ12496 1037 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B UBX7P38349 436 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B MPH1P40562 993 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B PHM7Q12252 991 aa2.36□□□□□ -2.03
YOR343W-BYOR343W-B ISC10P32645 267 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B MET1P36150 593 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B SHM1P37292 490 aaPredicted RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B VRP1P37370 817 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B PIK1P39104 1066 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B EMG1Q06287 252 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B TIF6Q12522 245 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B MTR4P47047 1073 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B GIS4Q04233 774 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B TY1A-DR3Q12441 440 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B PRP9P19736 530 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B NPR1P22211 790 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B LYP1P32487 611 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B HSE1P38753 452 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B GID8P40208 455 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B INP51P40559 946 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B HST3P53687 447 aa2.35□□□□□ -2.03
YOR343W-BYOR343W-B NAN1Q02931 896 aaKnown RBP2.35□□□□□ -2.03
YOR343W-BYOR343W-B BUL2Q03758 920 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms