RNA–Protein interactions for RNA: YMR309C

NIP1, Transcript of eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene NIP1, Length 2,439 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP1YMR309C VAN1P23642 535 aa1.37□□□□□ -2.19
NIP1YMR309C VMA3P25515 160 aa1.37□□□□□ -2.19
NIP1YMR309C SEA4P38164 1038 aa1.37□□□□□ -2.19
NIP1YMR309C YHL008CP38750 627 aa1.37□□□□□ -2.19
NIP1YMR309C PAN5P38787 379 aa1.37□□□□□ -2.19
NIP1YMR309C YIL165CP40446 119 aa1.37□□□□□ -2.19
NIP1YMR309C NCE103P53615 221 aa1.37□□□□□ -2.19
NIP1YMR309C SOG2Q08817 791 aa1.37□□□□□ -2.19
NIP1YMR309C GAL2P13181 574 aa1.37□□□□□ -2.19
NIP1YMR309C SUV3P32580 737 aa1.37□□□□□ -2.19
NIP1YMR309C BSD2P38356 321 aa1.37□□□□□ -2.19
NIP1YMR309C CWH41P53008 833 aa1.37□□□□□ -2.19
NIP1YMR309C PPT1P53043 513 aa1.37□□□□□ -2.19
NIP1YMR309C BIO5P53744 561 aaKnown RBP1.37□□□□□ -2.19
NIP1YMR309C MAE1P36013 669 aaKnown RBP1.36□□□□□ -2.19
NIP1YMR309C LDH1P38139 375 aa1.36□□□□□ -2.19
NIP1YMR309C ISW1P38144 1129 aa1.36□□□□□ -2.19
NIP1YMR309C POL5P39985 1022 aaKnown RBP1.36□□□□□ -2.19
NIP1YMR309C INP51P40559 946 aaKnown RBP1.36□□□□□ -2.19
NIP1YMR309C CDA2Q06703 312 aa1.36□□□□□ -2.19
NIP1YMR309C TRS33Q99394 268 aa1.36□□□□□ -2.19
NIP1YMR309C KTR7P40504 517 aa1.36□□□□□ -2.19
NIP1YMR309C SNM1P40993 198 aa1.36□□□□□ -2.19
NIP1YMR309C NSI1Q12457 570 aa1.36□□□□□ -2.19
NIP1YMR309C TFA2P36145 328 aa1.35□□□□□ -2.19
NIP1YMR309C YBR197CP38306 217 aa1.35□□□□□ -2.19
NIP1YMR309C YJL181WP46987 611 aa1.35□□□□□ -2.19
NIP1YMR309C ALD3P54114 506 aa1.35□□□□□ -2.19
NIP1YMR309C SPO71Q03868 1245 aa1.35□□□□□ -2.19
NIP1YMR309C ELG1Q12050 791 aa1.35□□□□□ -2.19
NIP1YMR309C GCD1P09032 578 aaPredicted RBP1.35□□□□□ -2.19
NIP1YMR309C FUS1P11710 512 aa1.35□□□□□ -2.19
NIP1YMR309C MSN1P22148 382 aa1.35□□□□□ -2.19
NIP1YMR309C ABZ1P37254 787 aaPredicted RBP1.35□□□□□ -2.19
NIP1YMR309C YBR287WP38355 427 aa1.35□□□□□ -2.19
NIP1YMR309C EMG1Q06287 252 aaKnown RBP1.35□□□□□ -2.19
NIP1YMR309C GIC2Q06648 383 aa1.35□□□□□ -2.19
NIP1YMR309C HVG1P0CE11 249 aa1.34□□□□□ -2.19
NIP1YMR309C TSA1P34760 196 aaKnown RBP1.34□□□□□ -2.19
NIP1YMR309C THI80P35202 319 aa1.34□□□□□ -2.19
NIP1YMR309C BOI1P38041 980 aaKnown RBP1.34□□□□□ -2.19
NIP1YMR309C TUB2P02557 457 aaKnown RBP1.34□□□□□ -2.2
NIP1YMR309C FOX2Q02207 900 aaKnown RBP1.34□□□□□ -2.2
NIP1YMR309C ERS1P17261 260 aa1.33□□□□□ -2.2
NIP1YMR309C TGL4P36165 910 aa1.33□□□□□ -2.2
NIP1YMR309C KIP3P53086 805 aaKnown RBP1.33□□□□□ -2.2
NIP1YMR309C ORC3P54790 616 aa1.33□□□□□ -2.2
NIP1YMR309C ISC10P32645 267 aa1.32□□□□□ -2.2
NIP1YMR309C LEO1P38439 464 aa1.32□□□□□ -2.2
NIP1YMR309C AIM46P38885 310 aa1.32□□□□□ -2.2
NIP1YMR309C MMM1P41800 426 aa1.32□□□□□ -2.2
NIP1YMR309C CIT3P43635 486 aa1.32□□□□□ -2.2
NIP1YMR309C ALD4P46367 519 aaKnown RBP1.32□□□□□ -2.2
NIP1YMR309C FAR11P53917 953 aa1.32□□□□□ -2.2
NIP1YMR309C HAS1Q03532 505 aaKnown RBP1.32□□□□□ -2.2
NIP1YMR309C YOR059CQ08448 450 aaKnown RBP1.32□□□□□ -2.2
NIP1YMR309C PRP6P19735 899 aaPredicted RBP1.32□□□□□ -2.2
NIP1YMR309C TTI1P36097 1038 aa1.32□□□□□ -2.2
NIP1YMR309C FIR1P40020 876 aa1.32□□□□□ -2.2
NIP1YMR309C NTA1P40354 457 aa1.32□□□□□ -2.2
NIP1YMR309C NEO1P40527 1151 aa1.32□□□□□ -2.2
NIP1YMR309C HXT8P40886 569 aa1.32□□□□□ -2.2
NIP1YMR309C RGD2P43556 714 aa1.32□□□□□ -2.2
NIP1YMR309C YJR124CP47159 448 aa1.32□□□□□ -2.2
NIP1YMR309C PUF6Q04373 656 aaKnown RBP1.32□□□□□ -2.2
NIP1YMR309C YOR223WQ12015 292 aa1.32□□□□□ -2.2
NIP1YMR309C GLO4Q12320 285 aa1.32□□□□□ -2.2
NIP1YMR309C HSP78P33416 811 aa1.31□□□□□ -2.2
NIP1YMR309C KTR2P33550 425 aa1.31□□□□□ -2.2
NIP1YMR309C WHI3P34761 661 aaKnown RBP1.31□□□□□ -2.2
NIP1YMR309C OYE3P41816 400 aaPredicted RBP1.31□□□□□ -2.2
NIP1YMR309C ECM23Q02710 187 aa1.31□□□□□ -2.2
NIP1YMR309C APC11Q12157 165 aa1.31□□□□□ -2.2
NIP1YMR309C SRS2P12954 1174 aa1.31□□□□□ -2.2
NIP1YMR309C UBX7P38349 436 aa1.31□□□□□ -2.2
NIP1YMR309C DMA2P53924 522 aa1.31□□□□□ -2.2
NIP1YMR309C RCM1P53972 490 aa1.31□□□□□ -2.2
NIP1YMR309C YLL054CQ12244 843 aa1.31□□□□□ -2.2
NIP1YMR309C GPT2P36148 743 aa1.3□□□□□ -2.2
NIP1YMR309C FET4P40988 552 aa1.3□□□□□ -2.2
NIP1YMR309C GCV1P48015 400 aa1.3□□□□□ -2.2
NIP1YMR309C ADP1P25371 1049 aa1.3□□□□□ -2.2
NIP1YMR309C PYC2P32327 1180 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C IRS4P36115 615 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C CWC15Q03772 175 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C DOT1Q04089 582 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C PUN1Q06991 263 aa1.3□□□□□ -2.2
NIP1YMR309C LPX1Q12405 387 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C TIF6Q12522 245 aaKnown RBP1.3□□□□□ -2.2
NIP1YMR309C PEX7P39108 375 aa1.29□□□□□ -2.2
NIP1YMR309C PSY2P40164 858 aa1.29□□□□□ -2.2
NIP1YMR309C ALT1P52893 592 aa1.29□□□□□ -2.2
NIP1YMR309C RIM8P53179 542 aa1.29□□□□□ -2.2
NIP1YMR309C YIG1Q08956 461 aa1.29□□□□□ -2.2
NIP1YMR309C RPS4AP0CX35 261 aaKnown RBP1.29□□□□□ -2.2
NIP1YMR309C RPS4BP0CX36 261 aaKnown RBP1.29□□□□□ -2.2
NIP1YMR309C PUP1P25043 261 aa1.29□□□□□ -2.2
NIP1YMR309C SMC1P32908 1225 aa1.29□□□□□ -2.2
NIP1YMR309C AIM3P38266 947 aaKnown RBP1.29□□□□□ -2.2
NIP1YMR309C RAD55P38953 406 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms