RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C RPC31P17890 251 aa2.25□□□□□ -2.05
IRC20YLR247C LCB1P25045 558 aaKnown RBP2.25□□□□□ -2.05
IRC20YLR247C RAD54P32863 898 aa2.25□□□□□ -2.05
IRC20YLR247C POL5P39985 1022 aaKnown RBP2.25□□□□□ -2.05
IRC20YLR247C MID1P41821 548 aa2.25□□□□□ -2.05
IRC20YLR247C CTI6Q08923 506 aa2.25□□□□□ -2.05
IRC20YLR247C PSF3Q12146 194 aa2.25□□□□□ -2.05
IRC20YLR247C DEF1P35732 738 aaKnown RBP2.25□□□□□ -2.05
IRC20YLR247C LDH1P38139 375 aa2.25□□□□□ -2.05
IRC20YLR247C HAP5Q02516 242 aa2.25□□□□□ -2.05
IRC20YLR247C FPR4Q06205 392 aaPredicted RBP2.25□□□□□ -2.05
IRC20YLR247C ACK1Q07622 623 aaPredicted RBP2.25□□□□□ -2.05
IRC20YLR247C SPB4P25808 606 aaPredicted RBP2.24□□□□□ -2.05
IRC20YLR247C ZDS1P50111 915 aaKnown RBP2.24□□□□□ -2.05
IRC20YLR247C TRM44Q02648 567 aaKnown RBP2.24□□□□□ -2.05
IRC20YLR247C YDR306CQ06640 478 aa2.24□□□□□ -2.05
IRC20YLR247C RLP24Q07915 199 aaKnown RBP2.24□□□□□ -2.05
IRC20YLR247C HEM1P09950 548 aaPredicted RBP2.24□□□□□ -2.05
IRC20YLR247C NIT1P40447 199 aa2.24□□□□□ -2.05
IRC20YLR247C AOS1Q06624 347 aa2.24□□□□□ -2.05
IRC20YLR247C HSP104P31539 908 aaKnown RBP2.24□□□□□ -2.05
IRC20YLR247C VPS4P52917 437 aa2.24□□□□□ -2.05
IRC20YLR247C GAS4Q08271 471 aa2.24□□□□□ -2.05
IRC20YLR247C GYP1Q08484 637 aa2.24□□□□□ -2.05
IRC20YLR247C WRS1Q12109 432 aaKnown RBP2.24□□□□□ -2.05
IRC20YLR247C FRD1P32614 470 aaKnown RBP2.23□□□□□ -2.05
IRC20YLR247C AFG2P32794 780 aa2.23□□□□□ -2.05
IRC20YLR247C YJL007CP47080 104 aa2.23□□□□□ -2.05
IRC20YLR247C AI4P03878 556 aa2.23□□□□□ -2.05
IRC20YLR247C MPH3P0CE00 602 aa2.23□□□□□ -2.05
IRC20YLR247C KEL1P38853 1164 aaKnown RBP2.23□□□□□ -2.05
IRC20YLR247C YGR273CP53329 174 aa2.23□□□□□ -2.05
IRC20YLR247C YNL050CP53952 270 aa2.23□□□□□ -2.05
IRC20YLR247C SUT2Q12286 268 aa2.23□□□□□ -2.05
IRC20YLR247C SNF3P10870 884 aa2.23□□□□□ -2.05
IRC20YLR247C NMD3P38861 518 aaKnown RBP2.23□□□□□ -2.05
IRC20YLR247C PRP42Q03776 544 aaKnown RBP2.23□□□□□ -2.05
IRC20YLR247C DPH6Q12429 685 aa2.23□□□□□ -2.05
IRC20YLR247C CBP1P07252 654 aa2.23□□□□□ -2.05
IRC20YLR247C SWI1P09547 1314 aa2.23□□□□□ -2.05
IRC20YLR247C AKL1P38080 1108 aaKnown RBP2.23□□□□□ -2.05
IRC20YLR247C PSF2P40359 213 aa2.23□□□□□ -2.05
IRC20YLR247C ARH1P48360 493 aa2.23□□□□□ -2.05
IRC20YLR247C CDC60P26637 1090 aaKnown RBP2.22□□□□□ -2.05
IRC20YLR247C NOP2P40991 618 aaKnown RBP2.22□□□□□ -2.05
IRC20YLR247C VPS70P47161 811 aa2.22□□□□□ -2.05
IRC20YLR247C MTC5Q03897 1148 aa2.22□□□□□ -2.05
IRC20YLR247C YPR117WQ06116 2489 aa2.22□□□□□ -2.05
IRC20YLR247C BCS1P32839 456 aa2.22□□□□□ -2.05
IRC20YLR247C TIM23P32897 222 aa2.22□□□□□ -2.05
IRC20YLR247C YGR035CP53222 116 aa2.22□□□□□ -2.05
IRC20YLR247C NMA111P53920 997 aa2.22□□□□□ -2.05
IRC20YLR247C NOG1Q02892 647 aaKnown RBP2.22□□□□□ -2.05
IRC20YLR247C RAD59Q12223 238 aa2.22□□□□□ -2.05
IRC20YLR247C LAM4P38800 1345 aa2.21□□□□□ -2.05
IRC20YLR247C BUD27P43573 796 aaKnown RBP RIP-Chip data2.21□□□□□ -2.05not detected
IRC20YLR247C ART5P53244 586 aaKnown RBP2.21□□□□□ -2.05
IRC20YLR247C AHC1Q12433 566 aa2.21□□□□□ -2.05
IRC20YLR247C IXR1P33417 597 aa2.21□□□□□ -2.06
IRC20YLR247C KSP1P38691 1029 aaKnown RBP2.21□□□□□ -2.06
IRC20YLR247C FCP1Q03254 732 aa2.21□□□□□ -2.06
IRC20YLR247C SGD1Q06132 899 aa2.21□□□□□ -2.06
IRC20YLR247C RAD53P22216 821 aa2.21□□□□□ -2.06
IRC20YLR247C GBP2P25555 427 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
IRC20YLR247C UIP5P36137 443 aa2.21□□□□□ -2.06
IRC20YLR247C XDJ1P39102 459 aa2.21□□□□□ -2.06
IRC20YLR247C TIF4631P39935 952 aaKnown RBP2.21□□□□□ -2.06
IRC20YLR247C NUG1P40010 520 aaKnown RBP2.21□□□□□ -2.06
IRC20YLR247C CAF20P12962 161 aaKnown RBP2.21□□□□□ -2.06
IRC20YLR247C PER1P25625 357 aa2.21□□□□□ -2.06
IRC20YLR247C MPC54Q08550 464 aa2.21□□□□□ -2.06
IRC20YLR247C ISU2Q12056 156 aa2.21□□□□□ -2.06
IRC20YLR247C RPN1P38764 993 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C MPP10P47083 593 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C SAS4Q04003 481 aa2.2□□□□□ -2.06
IRC20YLR247C YDJ1P25491 409 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C MSH4P40965 878 aaPredicted RBP2.2□□□□□ -2.06
IRC20YLR247C YNL034WP53963 612 aa2.2□□□□□ -2.06
IRC20YLR247C YNL018CP53976 612 aa2.2□□□□□ -2.06
IRC20YLR247C GIN4Q12263 1142 aa2.2□□□□□ -2.06
IRC20YLR247C MFT1P33441 392 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C REF2P42073 533 aaPredicted RBP2.2□□□□□ -2.06
IRC20YLR247C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
IRC20YLR247C ALE1Q08548 619 aa2.2□□□□□ -2.06
IRC20YLR247C NOP58Q12499 511 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C KEX1P09620 729 aa2.2□□□□□ -2.06
IRC20YLR247C RPL40AP0CH08 128 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C RPL40BP0CH09 128 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C KIN1P13185 1064 aa2.2□□□□□ -2.06
IRC20YLR247C PFK2P16862 959 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
IRC20YLR247C SER1P33330 395 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C GLO3P38682 493 aaKnown RBP2.2□□□□□ -2.06
IRC20YLR247C BNI4P53858 892 aa2.2□□□□□ -2.06
IRC20YLR247C AIM7Q12156 149 aa2.2□□□□□ -2.06
IRC20YLR247C PRE10P21242 288 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
IRC20YLR247C PAT1P25644 796 aaKnown RBP2.19□□□□□ -2.06
IRC20YLR247C SIS2P36024 562 aa2.19□□□□□ -2.06
IRC20YLR247C KRI1P42846 591 aaKnown RBP2.19□□□□□ -2.06
IRC20YLR247C RSC8P43609 557 aaKnown RBP2.19□□□□□ -2.06
IRC20YLR247C CFT2Q12102 859 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms