RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	ROM2	P51862	1356 aa	Known RBP	7.79	□□□□□ -1.16
MIA40	YKL195W	SWI1	P09547	1314 aa		7.78	□□□□□ -1.16
MIA40	YKL195W	PDC1	P06169	563 aa	Known RBP	7.78	□□□□□ -1.16
MIA40	YKL195W	VAS1	P07806	1104 aa	Known RBP	7.78	□□□□□ -1.16
MIA40	YKL195W	DLD1	P32891	587 aa		7.78	□□□□□ -1.16
MIA40	YKL195W	RRD1	P40454	393 aa	Known RBP	7.78	□□□□□ -1.16
MIA40	YKL195W	PKH1	Q03407	766 aa		7.78	□□□□□ -1.16
MIA40	YKL195W	LPD1	P09624	499 aa	Known RBP	7.77	□□□□□ -1.17
MIA40	YKL195W	GRX1	P25373	110 aa	Known RBP	7.77	□□□□□ -1.17
MIA40	YKL195W	YJU3	P28321	313 aa		7.77	□□□□□ -1.17
MIA40	YKL195W	APL2	P36000	726 aa	Predicted RBP	7.77	□□□□□ -1.17
MIA40	YKL195W	VPS24	P36095	224 aa	Known RBP	7.77	□□□□□ -1.17
MIA40	YKL195W	UBP12	P39538	1254 aa		7.77	□□□□□ -1.17
MIA40	YKL195W	HXT10	P43581	546 aa		7.77	□□□□□ -1.17
MIA40	YKL195W	YJR008W	P47085	338 aa		7.77	□□□□□ -1.17
MIA40	YKL195W	CDC16	P09798	840 aa		7.76	□□□□□ -1.17
MIA40	YKL195W	CLC1	P17891	233 aa		7.76	□□□□□ -1.17
MIA40	YKL195W	BRN1	P38170	754 aa		7.76	□□□□□ -1.17
MIA40	YKL195W	SSF1	P38789	453 aa	Predicted RBP	7.76	□□□□□ -1.17
MIA40	YKL195W	DOT5	P40553	215 aa		7.76	□□□□□ -1.17
MIA40	YKL195W	MDG1	P53885	366 aa		7.76	□□□□□ -1.17
MIA40	YKL195W	SUP35	P05453	685 aa	Known RBP	7.75	□□□□□ -1.17
MIA40	YKL195W	ITC1	P53125	1264 aa		7.75	□□□□□ -1.17
MIA40	YKL195W	FOX2	Q02207	900 aa	Known RBP	7.75	□□□□□ -1.17
MIA40	YKL195W	AFT1	P22149	690 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	DJP1	P40564	432 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	YJL181W	P46987	611 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	PUS6	P53294	404 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	PKH3	Q03306	898 aa	Predicted RBP	7.74	□□□□□ -1.17
MIA40	YKL195W	RMD1	Q03441	430 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	RGA2	Q06407	1009 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	PHM7	Q12252	991 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	PDR18	P53756	1333 aa		7.74	□□□□□ -1.17
MIA40	YKL195W	ASH1	P34233	588 aa		7.73	□□□□□ -1.17
MIA40	YKL195W	RPA14	P50106	137 aa		7.73	□□□□□ -1.17
MIA40	YKL195W	FPR4	Q06205	392 aa	Predicted RBP	7.73	□□□□□ -1.17
MIA40	YKL195W	YPR204W	Q08995	1032 aa		7.73	□□□□□ -1.17
MIA40	YKL195W	PSH1	Q12161	406 aa		7.73	□□□□□ -1.17
MIA40	YKL195W	YRF1-3	P0CX14	1859 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	YRF1-7	P0CX15	1859 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	YRF1-6	P53819	1859 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	SRS2	P12954	1174 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	PRP40	P33203	583 aa	Known RBP	7.72	□□□□□ -1.17
MIA40	YKL195W	SER1	P33330	395 aa	Known RBP	7.72	□□□□□ -1.17
MIA40	YKL195W	ECM21	P38167	1117 aa	Known RBP	7.72	□□□□□ -1.17
MIA40	YKL195W	HXT13	P39924	564 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	SNF7	P39929	240 aa	Known RBP	7.72	□□□□□ -1.17
MIA40	YKL195W	YGL082W	P53155	381 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	LSP1	Q12230	341 aa	Known RBP	7.72	□□□□□ -1.17
MIA40	YKL195W	YDL206W	Q12424	762 aa		7.72	□□□□□ -1.17
MIA40	YKL195W	NOT3	P06102	836 aa	Known RBP	7.71	□□□□□ -1.18
MIA40	YKL195W	TRM1	P15565	570 aa	Known RBP	7.71	□□□□□ -1.18
MIA40	YKL195W	YKR075C	P36155	307 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	KRI1	P42846	591 aa	Known RBP	7.71	□□□□□ -1.18
MIA40	YKL195W	MLC1	P53141	149 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	TBF1	Q02457	562 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	YPL062W	Q02781	134 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	YPR097W	Q06839	1073 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	BRE1	Q07457	700 aa	Known RBP	7.71	□□□□□ -1.18
MIA40	YKL195W	ALR1	Q08269	859 aa		7.71	□□□□□ -1.18
MIA40	YKL195W	ARG8	P18544	423 aa		7.7	□□□□□ -1.18
MIA40	YKL195W	ROX1	P25042	368 aa		7.7	□□□□□ -1.18
MIA40	YKL195W	YGL242C	P53066	181 aa		7.7	□□□□□ -1.18
MIA40	YKL195W	HXT17	P53631	564 aa		7.7	□□□□□ -1.18
MIA40	YKL195W	HST3	P53687	447 aa		7.7	□□□□□ -1.18
MIA40	YKL195W	SNU66	Q12420	587 aa	Predicted RBP	7.7	□□□□□ -1.18
MIA40	YKL195W	RNR2	P09938	399 aa	Known RBP	7.69	□□□□□ -1.18
MIA40	YKL195W	SSA2	P10592	639 aa	Known RBP	7.69	□□□□□ -1.18
MIA40	YKL195W	MET22	P32179	357 aa		7.69	□□□□□ -1.18
MIA40	YKL195W	SYH1	Q02875	849 aa	Known RBP	7.69	□□□□□ -1.18
MIA40	YKL195W	FCP1	Q03254	732 aa		7.69	□□□□□ -1.18
MIA40	YKL195W	MSP1	P28737	362 aa		7.68	□□□□□ -1.18
MIA40	YKL195W	RPN11	P43588	306 aa	Known RBP	7.68	□□□□□ -1.18
MIA40	YKL195W	MTC5	Q03897	1148 aa		7.68	□□□□□ -1.18
MIA40	YKL195W	COG8	Q04632	607 aa		7.68	□□□□□ -1.18
MIA40	YKL195W	RIM20	Q12033	661 aa		7.68	□□□□□ -1.18
MIA40	YKL195W	GAR1	P28007	205 aa	Known RBP	7.67	□□□□□ -1.18
MIA40	YKL195W	SLA1	P32790	1244 aa		7.67	□□□□□ -1.18
MIA40	YKL195W	RSC30	P38781	883 aa		7.67	□□□□□ -1.18
MIA40	YKL195W	ALO1	P54783	526 aa	Known RBP	7.67	□□□□□ -1.18
MIA40	YKL195W	RAD59	Q12223	238 aa		7.67	□□□□□ -1.18
MIA40	YKL195W	MRPS35	P53292	345 aa		7.66	□□□□□ -1.18
MIA40	YKL195W	TFB3	Q03290	321 aa		7.66	□□□□□ -1.18
MIA40	YKL195W	TPM1	P17536	199 aa	Known RBP	7.65	□□□□□ -1.18
MIA40	YKL195W	AAP1	P37898	856 aa	Known RBP	7.65	□□□□□ -1.18
MIA40	YKL195W	ARL1	P38116	183 aa	Known RBP	7.65	□□□□□ -1.18
MIA40	YKL195W	STM1	P39015	273 aa	Known RBP	7.65	□□□□□ -1.18
MIA40	YKL195W	HPC2	Q01448	625 aa		7.65	□□□□□ -1.18
MIA40	YKL195W	VPS20	Q04272	221 aa		7.65	□□□□□ -1.18
MIA40	YKL195W	NYV1	Q12255	253 aa		7.65	□□□□□ -1.18
MIA40	YKL195W	TRL1	P09880	827 aa	Known RBP	7.64	□□□□□ -1.19
MIA40	YKL195W	KTR3	P38130	404 aa	Predicted RBP	7.64	□□□□□ -1.19
MIA40	YKL195W	PBY1	P38254	753 aa		7.64	□□□□□ -1.19
MIA40	YKL195W	YGL081W	P53156	320 aa		7.64	□□□□□ -1.19
MIA40	YKL195W	HAT1	Q12341	374 aa		7.64	□□□□□ -1.19
MIA40	YKL195W	SSK22	P25390	1331 aa	Predicted RBP	7.63	□□□□□ -1.19
MIA40	YKL195W	BIK1	P11709	440 aa		7.63	□□□□□ -1.19
MIA40	YKL195W	SEC18	P18759	758 aa	Known RBP	7.63	□□□□□ -1.19
MIA40	YKL195W	UBP1	P25037	809 aa		7.63	□□□□□ -1.19
MIA40	YKL195W	YJR115W	P47152	169 aa		7.63	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms