RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
SOD1	YJR104C	UBP16	Q02863	499 aa		4.28	□□□□□ -1.72
SOD1	YJR104C	DIB1	Q06819	143 aa	Predicted RBP	4.28	□□□□□ -1.72
SOD1	YJR104C	YRR1	Q12172	810 aa		4.28	□□□□□ -1.72
SOD1	YJR104C	TUS1	Q06412	1307 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	HSP82	P02829	709 aa	Known RBP	4.27	□□□□□ -1.73
SOD1	YJR104C	CAN1	P04817	590 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	CBP1	P07252	654 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	ESS1	P22696	170 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	ROX1	P25042	368 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	UIP5	P36137	443 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	AIM21	P40563	679 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	ZDS1	P50111	915 aa	Known RBP	4.27	□□□□□ -1.73
SOD1	YJR104C	ISU2	Q12056	156 aa		4.27	□□□□□ -1.73
SOD1	YJR104C	NOP58	Q12499	511 aa	Known RBP	4.27	□□□□□ -1.73
SOD1	YJR104C	ARG8	P18544	423 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	SCJ1	P25303	377 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	BIM1	P40013	344 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	NMA111	P53920	997 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	NCR1	Q12200	1170 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	RAD59	Q12223	238 aa		4.26	□□□□□ -1.73
SOD1	YJR104C	SPT2	P06843	333 aa	Predicted RBP	4.25	□□□□□ -1.73
SOD1	YJR104C	SPC110	P32380	944 aa		4.25	□□□□□ -1.73
SOD1	YJR104C	NPL4	P33755	580 aa		4.25	□□□□□ -1.73
SOD1	YJR104C	ART5	P53244	586 aa	Known RBP	4.25	□□□□□ -1.73
SOD1	YJR104C	YDL129W	Q07555	291 aa		4.25	□□□□□ -1.73
SOD1	YJR104C	PLP2	Q12017	286 aa		4.25	□□□□□ -1.73
SOD1	YJR104C	SLY41	P22215	453 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	BOI1	P38041	980 aa	Known RBP	4.24	□□□□□ -1.73
SOD1	YJR104C	NMD2	P38798	1089 aa	Known RBP	4.24	□□□□□ -1.73
SOD1	YJR104C	ATG32	P40458	529 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	YIR014W	P40570	242 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	SMC3	P47037	1230 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	GAS5	Q08193	484 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	YML133C	Q03099	1374 aa		4.24	□□□□□ -1.73
SOD1	YJR104C	YJU3	P28321	313 aa		4.23	□□□□□ -1.73
SOD1	YJR104C	FRD1	P32614	470 aa	Known RBP	4.23	□□□□□ -1.73
SOD1	YJR104C	ERG7	P38604	731 aa		4.23	□□□□□ -1.73
SOD1	YJR104C	YNL115C	P53925	644 aa		4.23	□□□□□ -1.73
SOD1	YJR104C	SAS4	Q04003	481 aa		4.23	□□□□□ -1.73
SOD1	YJR104C	UTP10	P42945	1769 aa	Known RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	FMP27	Q06179	2628 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	TIF1	P10081	395 aa	Known RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	NUD1	P32336	851 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	SER1	P33330	395 aa	Known RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	STM1	P39015	273 aa	Known RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	SLN1	P39928	1220 aa	Predicted RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	RTF1	P53064	558 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	ATG1	P53104	897 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	TBF1	Q02457	562 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	HAP5	Q02516	242 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	RRG1	Q12167	365 aa	Predicted RBP	4.22	□□□□□ -1.73
SOD1	YJR104C	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	HKR1	P41809	1802 aa		4.22	□□□□□ -1.73
SOD1	YJR104C	SEN1	Q00416	2231 aa	Known RBP	4.21	□□□□□ -1.74
SOD1	YJR104C	DPS1	P04802	557 aa	Known RBP	4.21	□□□□□ -1.74
SOD1	YJR104C	RDH54	P38086	958 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	SAP30	P38429	201 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	AFG3	P39925	761 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	CTR9	P89105	1077 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	SYF1	Q04048	859 aa	Predicted RBP	4.21	□□□□□ -1.74
SOD1	YJR104C	ICL2	Q12031	575 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	FLO11	P08640	1367 aa		4.21	□□□□□ -1.74
SOD1	YJR104C	NOT3	P06102	836 aa	Known RBP	4.2	□□□□□ -1.74
SOD1	YJR104C	KEX2	P13134	814 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	BIO2	P32451	375 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	ESL2	P36168	1195 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	UTP7	P40055	554 aa	Known RBP	4.2	□□□□□ -1.74
SOD1	YJR104C	PIL1	P53252	339 aa	Known RBP	4.2	□□□□□ -1.74
SOD1	YJR104C	YNL108C	P53929	270 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	YPR204W	Q08995	1032 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	PSH1	Q12161	406 aa		4.2	□□□□□ -1.74
SOD1	YJR104C	MDM20	Q12387	796 aa	Known RBP	4.2	□□□□□ -1.74
SOD1	YJR104C	PDR1	P12383	1068 aa		4.19	□□□□□ -1.74
SOD1	YJR104C	SPT5	P27692	1063 aa	Known RBP	4.19	□□□□□ -1.74
SOD1	YJR104C	MSH4	P40965	878 aa	Predicted RBP	4.19	□□□□□ -1.74
SOD1	YJR104C	ARH1	P48360	493 aa		4.19	□□□□□ -1.74
SOD1	YJR104C	MDG1	P53885	366 aa		4.19	□□□□□ -1.74
SOD1	YJR104C	ELP4	Q02884	456 aa	Known RBP	4.19	□□□□□ -1.74
SOD1	YJR104C	PHM7	Q12252	991 aa		4.19	□□□□□ -1.74
SOD1	YJR104C	SUT2	Q12286	268 aa		4.19	□□□□□ -1.74
SOD1	YJR104C	ERG12	P07277	443 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	GAL2	P13181	574 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	TRM1	P15565	570 aa	Known RBP	4.18	□□□□□ -1.74
SOD1	YJR104C	IRE1	P32361	1115 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	RAD26	P40352	1085 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	NIT1	P40447	199 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	FKH1	P40466	484 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	YPP1	P46951	817 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	PUS6	P53294	404 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	YNL011C	P53980	444 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	GAS4	Q08271	471 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	NUP145	P49687	1317 aa		4.18	□□□□□ -1.74
SOD1	YJR104C	GCD11	P32481	527 aa	Known RBP	4.17	□□□□□ -1.74
SOD1	YJR104C	VPS24	P36095	224 aa	Known RBP	4.17	□□□□□ -1.74
SOD1	YJR104C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SOD1	YJR104C	YGL082W	P53155	381 aa		4.17	□□□□□ -1.74
SOD1	YJR104C	SEN54	Q02825	467 aa	Predicted RBP	4.17	□□□□□ -1.74
SOD1	YJR104C	PPM2	Q08282	695 aa		4.17	□□□□□ -1.74
SOD1	YJR104C	GIN4	Q12263	1142 aa		4.17	□□□□□ -1.74

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