RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	YML131W	Q03102	365 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	PGC1	Q08959	321 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	NOP58	Q12499	511 aa	Known RBP	5.24	□□□□□ -1.57
HUL4	YJR036C	LSO1	Q3E827	93 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	GAL1	P04385	528 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	SSH4	P32343	579 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	VPH1	P32563	840 aa	Known RBP	5.24	□□□□□ -1.57
HUL4	YJR036C	FAA4	P47912	694 aa	Known RBP	5.24	□□□□□ -1.57
HUL4	YJR036C	TYW3	P53177	273 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	ELA1	P53861	379 aa	Predicted RBP	5.24	□□□□□ -1.57
HUL4	YJR036C	SPO71	Q03868	1245 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	YLR352W	Q06479	807 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	REH1	Q06709	432 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	AVO1	Q08236	1176 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	MED1	Q12321	566 aa		5.24	□□□□□ -1.57
HUL4	YJR036C	MVP1	P40959	511 aa	Known RBP	5.23	□□□□□ -1.57
HUL4	YJR036C	YGR237C	P50089	785 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	FOX2	Q02207	900 aa	Known RBP	5.23	□□□□□ -1.57
HUL4	YJR036C	NYV1	Q12255	253 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	SUV3	P32580	737 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	PEX5	P35056	612 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	ACS2	P52910	683 aa	Known RBP	5.23	□□□□□ -1.57
HUL4	YJR036C	YGR122W	P53272	402 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	APP1	P53933	587 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	PLP2	Q12017	286 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	YDR056C	Q12025	205 aa		5.23	□□□□□ -1.57
HUL4	YJR036C	PLC1	P32383	869 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	KTR2	P33550	425 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	NUP120	P35729	1037 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	TRS120	Q04183	1289 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	MCM16	Q12262	181 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	RGP1	P16664	663 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	SMY2	P32909	740 aa	Known RBP	5.22	□□□□□ -1.57
HUL4	YJR036C	VPS41	P38959	992 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	TGL3	P40308	642 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	MET14	Q02196	202 aa		5.22	□□□□□ -1.57
HUL4	YJR036C	SGT2	Q12118	346 aa	Known RBP	5.22	□□□□□ -1.57
HUL4	YJR036C	CYT1	P07143	309 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	MSM1	P22438	575 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	EUG1	P32474	517 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	TRZ1	P36159	838 aa	Predicted RBP	5.21	□□□□□ -1.57
HUL4	YJR036C	CDC27	P38042	758 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	GCD10	P41814	478 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	BNI4	P53858	892 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	BNI5	P53890	448 aa	Known RBP	5.21	□□□□□ -1.57
HUL4	YJR036C	SSP2	Q08646	371 aa		5.21	□□□□□ -1.57
HUL4	YJR036C	CHD1	P32657	1468 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	CAN1	P04817	590 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	FUR4	P05316	633 aa	Known RBP	5.21	□□□□□ -1.58
HUL4	YJR036C	ARG8	P18544	423 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	MCM10	P32354	571 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	PET112	P33893	541 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	RAD17	P48581	401 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	REC8	Q12188	680 aa		5.21	□□□□□ -1.58
HUL4	YJR036C	RRP36	Q12481	300 aa	Predicted RBP	5.21	□□□□□ -1.58
HUL4	YJR036C	TRP5	P00931	707 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	RED1	P14291	827 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	PET123	P17558	318 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	PHO87	P25360	923 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	UGA3	P26370	528 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	MNT3	P40549	630 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	ALA1	P40825	983 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	VTC2	P43585	828 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	NAF1	P53919	492 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	OPI10	Q08202	246 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	HXK1	P04806	485 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	TOM70	P07213	617 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	YEF3	P16521	1044 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	MEF1	P25039	761 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	JNM1	P36224	373 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	SAP185	P40856	1058 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	NAN1	Q02931	896 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	SPN1	Q06505	410 aa	Predicted RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	SPO16	P17122	198 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	HSP78	P33416	811 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	SOL3	P38858	249 aa		5.2	□□□□□ -1.58
HUL4	YJR036C	HAA1	Q12753	694 aa	Known RBP	5.2	□□□□□ -1.58
HUL4	YJR036C	CCT3	P39077	534 aa	Known RBP	5.19	□□□□□ -1.58
HUL4	YJR036C	YPP1	P46951	817 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	UBA2	P52488	636 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	RNH1	Q04740	348 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	YLR001C	Q07895	862 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	RRP6	Q12149	733 aa	Known RBP	5.19	□□□□□ -1.58
HUL4	YJR036C	YRR1	Q12172	810 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	DPH6	Q12429	685 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	CDC34	P14682	295 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	PRI2	P20457	528 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	UBP1	P25037	809 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	DBF20	P32328	564 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	ISF1	P32488	338 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	MXR1	P40029	184 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	APL6	P46682	809 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
HUL4	YJR036C	SGM1	P47166	707 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	YSH1	Q06224	779 aa	Predicted RBP	5.19	□□□□□ -1.58
HUL4	YJR036C	YPR172W	Q06608	200 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	APC5	Q08683	685 aa		5.19	□□□□□ -1.58
HUL4	YJR036C	SPS1	P08458	490 aa		5.18	□□□□□ -1.58
HUL4	YJR036C	PIM1	P36775	1133 aa		5.18	□□□□□ -1.58
HUL4	YJR036C	VPS8	P39702	1274 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms